Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 AC018717.1-201ENST00000457712 1505 ntBASIC6.2□□□□□ -1.42
CCM2LQ9NUG4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 RNA5SP122-201ENST00000384457 108 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 HMGB1P49-201ENST00000418882 569 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 RPS3AP37-201ENST00000419176 745 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 KRR1P1-201ENST00000419430 803 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 THEM7P-201ENST00000419556 672 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 OR2X1P-201ENST00000421144 687 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC084290.1-201ENST00000434995 374 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 MYL6P3-201ENST00000436904 432 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC016908.1-201ENST00000442571 1219 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 DNAJC19P5-201ENST00000443295 316 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AL592437.1-201ENST00000443781 492 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AL035407.2-201ENST00000454090 378 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC018638.3-201ENST00000461273 132 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 RNA5SP278-201ENST00000517055 102 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 MTND4P33-201ENST00000556706 766 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 MIR212-201ENST00000586026 110 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AL035411.2-201ENST00000604022 421 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 MIR6861-201ENST00000618657 64 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AL161420.1-201ENST00000619393 264 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AP003485.2-201ENST00000623636 610 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 AC140479.4-205ENST00000636339 820 ntBASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCM2LQ9NUG4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 DLEU2L-201ENST00000371086 3555 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL121950.1-201ENST00000624993 2077 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 SNORD116-12-201ENST00000384468 92 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 RNU6-636P-201ENST00000384598 107 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 SNORD65C-201ENST00000390962 71 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC092642.1-201ENST00000392417 425 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 PTPN2P1-201ENST00000423212 1072 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC010099.3-201ENST00000423896 409 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 RPSAP32-201ENST00000432681 526 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 RPL7P34-201ENST00000433316 712 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 BX005266.3-201ENST00000443013 1075 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 RPL23AP64-201ENST00000469465 435 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC128716.1-201ENST00000475129 166 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC087672.1-201ENST00000479876 766 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC119751.1-201ENST00000513357 765 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms