Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNA5SP319-201ENST00000362768 119 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 SNORD56.6-201ENST00000384569 71 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AL158827.1-201ENST00000416300 391 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 AL391987.1-201ENST00000441025 200 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 RN7SL197P-201ENST00000466981 299 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 RPL35AP19-201ENST00000469425 329 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC090638.1-201ENST00000498296 909 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 RN7SKP99-201ENST00000517028 307 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC078878.1-201ENST00000539832 958 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AL589674.2-201ENST00000604304 337 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC010245.2-201ENST00000606908 1167 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CISHQ9NSE2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CISHQ9NSE2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AL512422.1-201ENST00000407033 553 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 AL133482.1-201ENST00000415988 498 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 AL513325.1-201ENST00000417716 1034 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 BX276092.6-201ENST00000430476 250 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC023271.1-201ENST00000445936 1090 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC016724.1-201ENST00000453215 421 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 BX276092.8-201ENST00000455722 250 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 RN7SL51P-201ENST00000468230 285 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 RN7SL174P-201ENST00000475578 289 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 RN7SL101P-201ENST00000496350 279 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 MTND6P2-201ENST00000512226 524 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC079064.1-201ENST00000528365 362 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC012146.2-201ENST00000576545 416 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AP000769.2-201ENST00000602344 396 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 PCA3_2.1-201ENST00000612507 409 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 MIR6133-201ENST00000617057 108 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 AC073869.8-201ENST00000641806 335 ntBASIC5.84□□□□□ -1.47
CISHQ9NSE2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CISHQ9NSE2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CISHQ9NSE2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CISHQ9NSE2 AL360270.2-201ENST00000562952 5985 ntBASIC5.84□□□□□ -1.48
CISHQ9NSE2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CISHQ9NSE2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
CISHQ9NSE2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 OR52B5P-204ENST00000641744 3467 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 CASC19-248ENST00000641674 1356 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 MIR323A-201ENST00000362199 86 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 CHEK2P5-201ENST00000423877 246 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 AL359265.1-201ENST00000440296 795 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC100832.1-201ENST00000471945 383 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 EIF1P7-201ENST00000487533 337 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC109464.1-201ENST00000511091 819 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms