Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.98□□□□□ -1.61
KIAA1549Q9HCM3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
KIAA1549Q9HCM3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KIAA1549Q9HCM3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AL355488.2-201ENST00000609909 2850 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 MRPS21P3-201ENST00000436696 262 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 LDHAP2-201ENST00000437325 985 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AL606490.1-201ENST00000452266 765 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 LDHBP2-201ENST00000456969 1005 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 PPP1R11P1-201ENST00000486095 376 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 OR11H3P-201ENST00000554547 982 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 OR11J2P-201ENST00000555298 907 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 SUGT1P3-202ENST00000604259 383 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 TAS2R6P-201ENST00000605022 826 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AC135068.5-201ENST00000624197 983 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 MAPK10-263ENST00000641052 4307 ntBASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.97□□□□□ -1.61
KIAA1549Q9HCM3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 DBIP1-201ENST00000401435 260 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 GAPDHP42-201ENST00000406848 981 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 RNGTTP1-201ENST00000420965 728 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 AK3P5-201ENST00000432033 519 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 RPS23P9-201ENST00000448848 438 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 RPS23P2-201ENST00000463671 415 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 RN7SL188P-201ENST00000469842 285 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 RN7SL583P-201ENST00000475692 287 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 OR2AO1P-201ENST00000476497 403 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 RN7SL184P-201ENST00000488308 297 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 BX510359.5-201ENST00000515651 304 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 snoU109.5-201ENST00000516231 132 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 AL139407.1-201ENST00000613826 1175 ntBASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.96□□□□□ -1.61
KIAA1549Q9HCM3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AC078880.4-201ENST00000617627 1749 ntBASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AL034546.1-201ENST00000623740 3693 ntBASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 SNORD125-201ENST00000459538 96 ntBASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 RPL32P9-201ENST00000487963 407 ntBASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AC110775.1-201ENST00000513721 462 ntBASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AC130364.2-201ENST00000528639 604 ntBASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.96□□□□□ -1.62
KIAA1549Q9HCM3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms