Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL359715.1-201ENST00000404330 555 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 GAPDHP63-201ENST00000405405 1007 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL136131.1-201ENST00000406079 803 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 MIR1272-201ENST00000408106 129 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 U3.33-201ENST00000408117 204 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RNU2-29P-201ENST00000410423 189 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RN7SKP127-201ENST00000410443 354 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RNU4-6P-201ENST00000410804 122 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 Y_RNA.646-201ENST00000410980 101 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RPL4P5-201ENST00000413888 1276 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 ACTG1P1-201ENST00000415794 1129 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC093155.2-201ENST00000420734 937 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL590609.2-201ENST00000421430 368 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 E2F4P1-201ENST00000422443 1133 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC009965.2-201ENST00000425328 970 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC096632.1-201ENST00000427395 310 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 TRIM26BP-206ENST00000427723 753 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC018804.1-201ENST00000430381 618 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RPSAP17-201ENST00000437336 883 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL356498.1-201ENST00000443334 334 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RPL17P1-201ENST00000445304 536 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 UBQLN4P2-201ENST00000446233 948 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 HMGN3P1-201ENST00000453847 193 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 ARAFP3-201ENST00000454154 490 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RPS29P15-201ENST00000458329 171 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RPL7L1P8-201ENST00000469911 741 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RPL22P13-201ENST00000493291 347 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RPL19P11-201ENST00000495944 589 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 Y_RNA.654-201ENST00000497848 106 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 HNRNPA1P44-201ENST00000503999 879 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 NACAP6-201ENST00000509572 622 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC097460.2-201ENST00000511857 741 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 KRTAP9-12P-201ENST00000514388 532 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 TRIM51DP-201ENST00000529746 596 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 OR5F2P-201ENST00000532761 941 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 LINC02454-202ENST00000541391 612 ntTSL 3 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC026458.1-201ENST00000564330 438 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 NDUFA3P6-201ENST00000571486 250 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 MIR3146-201ENST00000580367 79 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC004147.5-201ENST00000581727 536 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC016727.2-201ENST00000603988 621 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AL359704.2-201ENST00000604335 521 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 GOLGA6L17P-201ENST00000611297 586 ntTSL 4 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC007450.2-201ENST00000614160 290 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RN7SL673P-201ENST00000616262 237 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RN7SL719P-201ENST00000620196 237 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RN7SL469P-201ENST00000621501 237 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AP003108.5-201ENST00000623008 895 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC016866.3-201ENST00000624037 714 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 OR7A2P-202ENST00000641312 1219 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC003973.3-201ENST00000624863 2822 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 AC087501.5-201ENST00000607496 2374 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 CDC27P3-201ENST00000635418 1910 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 API5P2-201ENST00000397055 1498 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 NF1P8-201ENST00000415351 1461 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 KPNA2P2-201ENST00000419546 1489 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms