Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC091912.1-201ENST00000511351 248 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AP006245.2-201ENST00000522004 300 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 OR5AM1P-201ENST00000532136 1032 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AL135999.3-201ENST00000610501 812 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AL136228.1-201ENST00000622221 319 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 QRSL1P1-201ENST00000400977 1540 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 PSG10P-201ENST00000501199 1500 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC28BQ9BUN5 AC027088.4-201ENST00000611559 1947 ntBASIC5.46□□□□□ -1.53
CCDC28BQ9BUN5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC28BQ9BUN5 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.53
CCDC28BQ9BUN5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
CCDC28BQ9BUN5 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.46□□□□□ -1.53
CCDC28BQ9BUN5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC28BQ9BUN5 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC017079.1-201ENST00000333650 415 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 UBBP2-201ENST00000376781 231 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 SNORA48.4-201ENST00000391089 134 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 RPL10P10-201ENST00000403509 664 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 RN7SKP29-201ENST00000410957 272 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AL445213.1-201ENST00000412589 747 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 TPTE2P1-204ENST00000435256 593 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 IGBP1P3-201ENST00000447449 1000 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC005077.1-201ENST00000449226 375 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 UBFD1P1-201ENST00000473259 814 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC073610.1-201ENST00000489971 396 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AP005901.4-201ENST00000577336 569 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC115989.2-201ENST00000578640 563 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 MIR4260-201ENST00000583107 67 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 MIR6809-201ENST00000612189 116 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC015819.1-201ENST00000613588 663 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC090607.5-201ENST00000615692 224 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 AC022417.1-201ENST00000624768 1303 ntBASIC5.46□□□□□ -1.54
CCDC28BQ9BUN5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC068870.1-201ENST00000563737 2455 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 MIR1271-201ENST00000408537 86 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 PRPF38AP1-201ENST00000451976 933 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC093166.4-201ENST00000457867 318 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 MYL12BP2-201ENST00000503948 512 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC093325.1-201ENST00000508378 326 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC009879.1-201ENST00000520029 839 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC092332.1-201ENST00000563684 829 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 LINC00556-201ENST00000569603 412 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 MRPL45P2-203ENST00000573318 473 ntBASIC5.45□□□□□ -1.54
CCDC28BQ9BUN5 AC004232.2-201ENST00000574245 821 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms