Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 OR6C64P-201ENST00000419708 825 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 AKR1B10P1-201ENST00000425765 942 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 VTI1BP4-201ENST00000427516 527 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 MAPRE1P3-201ENST00000435438 796 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC097523.2-201ENST00000435551 652 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 ARL5AP3-201ENST00000439327 386 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 RPL6P30-201ENST00000443382 862 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC097463.1-201ENST00000447288 481 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 PRMT5P1-201ENST00000514351 598 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 snoU109.6-201ENST00000516831 118 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 AC007342.9-201ENST00000623877 1385 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 EIF3EP1-201ENST00000433978 1316 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 MT-RNR2-201ENST00000387347 1559 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 BMS1P3-201ENST00000372011 932 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AL607077.1-201ENST00000401718 499 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 RN7SKP151-201ENST00000410230 316 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 RNA5SP156-201ENST00000410250 110 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC069154.1-201ENST00000432914 542 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 TXNP2-201ENST00000443918 295 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 GAPDHP23-201ENST00000444823 993 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 CALM1P2-201ENST00000452941 448 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC002553.3-201ENST00000453002 341 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 PPIAP7-201ENST00000454070 489 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AP002884.1-201ENST00000479691 655 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 MTND3P6-201ENST00000485242 339 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 OR52A4P-203ENST00000498233 1014 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 OR7E99P-201ENST00000505750 922 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 OR7E10P-201ENST00000526420 991 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AP000620.1-201ENST00000527147 504 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC092865.1-201ENST00000544395 1023 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC007346.1-201ENST00000569208 867 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC084373.1-201ENST00000603311 235 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC096553.1-201ENST00000605169 829 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC034236.3-201ENST00000605999 461 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC022106.1-201ENST00000612834 766 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC002044.3-201ENST00000623314 541 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 AL121768.1-201ENST00000613917 2544 ntBASIC5.76□□□□□ -1.49
VMP1Q96GC9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VMP1Q96GC9 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VMP1Q96GC9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
VMP1Q96GC9 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VMP1Q96GC9 ADAM24P-201ENST00000398655 2101 ntBASIC5.75□□□□□ -1.49
VMP1Q96GC9 IFIT1P1-201ENST00000400497 1449 ntBASIC5.75□□□□□ -1.49
VMP1Q96GC9 AC007342.7-201ENST00000624610 2337 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms