Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RNF19BPY-201ENST00000458209 1550 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 RNA5SP30-201ENST00000365552 115 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 MIR1203-201ENST00000408812 85 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 AL035660.1-201ENST00000422041 222 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 RN7SL273P-201ENST00000481561 299 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 RN7SKP253-201ENST00000516424 309 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 RNU6-964P-201ENST00000516524 69 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 SEPT10P1-201ENST00000517342 1162 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC025857.1-201ENST00000525252 377 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 OR4A17P-201ENST00000526032 904 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 NPM1P5-201ENST00000557228 838 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 BX323046.1-201ENST00000610145 535 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 MIR6768-201ENST00000610734 72 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC109309.2-201ENST00000612597 332 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC126175.1-201ENST00000617041 758 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 MIR6133-201ENST00000617057 108 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC253576.2-201ENST00000618815 580 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 AL590396.2-201ENST00000636511 1041 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 MIPEPP2-201ENST00000422560 1819 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 MTCO1P11-201ENST00000429111 1528 ntBASIC5.82□□□□□ -1.48
RTP4Q96DX8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTP4Q96DX8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.82□□□□□ -1.48
RTP4Q96DX8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC092451.3-201ENST00000625067 1343 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 MIR323A-201ENST00000362199 86 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 RN7SKP145-201ENST00000363291 303 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 RN7SKP292-201ENST00000365522 317 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 OR6K3-202ENST00000368146 996 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 EEF1B2P8-201ENST00000414101 671 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC106901.1-201ENST00000425086 698 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 PCBP2P1-201ENST00000437262 977 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 NANOGP9-201ENST00000439890 892 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 AP006222.1-205ENST00000450734 457 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 UBFD1P1-201ENST00000473259 814 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 RN7SL214P-201ENST00000487317 265 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC021678.3-201ENST00000517893 476 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC122688.1-201ENST00000541494 223 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 HSPE1P2-201ENST00000554777 306 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC007448.1-201ENST00000582714 234 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC009237.13-201ENST00000603193 276 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 RPL12P48-201ENST00000605620 304 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 AC007786.3-201ENST00000615154 596 ntBASIC5.81□□□□□ -1.48
RTP4Q96DX8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTP4Q96DX8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.81□□□□□ -1.48
RTP4Q96DX8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms