Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC4Q92889 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC005242.1-201ENST00000585658 438 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AP005229.2-201ENST00000609980 697 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 RN7SL261P-201ENST00000613441 282 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC048341.3-201ENST00000619323 491 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 AL669942.2-201ENST00000620352 697 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.9□□□□□ -1.3
ERCC4Q92889 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
ERCC4Q92889 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC4Q92889 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC4Q92889 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.9□□□□□ -1.31
ERCC4Q92889 AC005261.6-201ENST00000623072 1387 ntBASIC6.9□□□□□ -1.31
ERCC4Q92889 TCP1P3-201ENST00000414406 1498 ntBASIC6.9□□□□□ -1.31
ERCC4Q92889 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.9□□□□□ -1.31
ERCC4Q92889 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC4Q92889 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
ERCC4Q92889 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.9□□□□□ -1.31
ERCC4Q92889 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC4Q92889 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.9□□□□□ -1.31
ERCC4Q92889 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC4Q92889 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.9□□□□□ -1.31
ERCC4Q92889 AC015689.2-201ENST00000528172 1738 ntBASIC6.9□□□□□ -1.31
ERCC4Q92889 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC4Q92889 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC4Q92889 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC4Q92889 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC4Q92889 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC4Q92889 RNU6-1331P-201ENST00000363658 106 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 RN7SKP28-201ENST00000364770 305 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 ST13P16-201ENST00000401760 781 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 Z86062.1-201ENST00000406773 777 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC4Q92889 XKRYP1-201ENST00000423438 492 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 XKRYP2-201ENST00000432915 492 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AL645939.3-201ENST00000435408 225 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AC013403.1-201ENST00000436954 263 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC4Q92889 CYCSP51-201ENST00000443545 318 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AL512593.1-201ENST00000444758 779 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 RN7SL393P-201ENST00000463588 296 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 RPL9P15-201ENST00000491096 532 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 NACAP5-201ENST00000509863 636 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AC112673.1-201ENST00000513168 575 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AC008429.4-201ENST00000521201 182 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC4Q92889 OR6M2P-201ENST00000529831 871 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
ERCC4Q92889 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 EIF1P5-201ENST00000585002 234 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AC063977.7-201ENST00000594454 337 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 DYNLL1P1-201ENST00000595442 269 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 AC124016.2-201ENST00000610058 665 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AC241377.1-201ENST00000619797 406 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AC068213.1-201ENST00000625124 226 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 FBXL21-201ENST00000297158 1305 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC4Q92889 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC4Q92889 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC4Q92889 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC4Q92889 AL161756.3-201ENST00000641216 2071 ntBASIC6.89□□□□□ -1.31
ERCC4Q92889 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC4Q92889 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC4Q92889 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.88□□□□□ -1.31
ERCC4Q92889 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 CASC19-246ENST00000641625 1606 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 AL929601.4-201ENST00000613011 1341 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms