Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 NPM1P40-201ENST00000412758 733 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 NRBF2P2-201ENST00000413087 861 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AL133482.1-201ENST00000415988 498 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC069213.2-201ENST00000420238 366 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AL022319.1-201ENST00000458183 1167 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AP001521.2-201ENST00000608772 546 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC063976.2-201ENST00000425667 3556 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 RN7SKP149-201ENST00000363008 344 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 MIR4270-201ENST00000581799 70 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 OLMALINC-203ENST00000641087 3779 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 THAP12P4-201ENST00000528321 2266 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AL359265.2-201ENST00000434367 631 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC122718.1-201ENST00000439448 744 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 FAM133DP-201ENST00000464802 691 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC092724.1-201ENST00000624623 3397 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 DOCK11P1-201ENST00000553480 5932 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 RNA5SP113-201ENST00000410486 84 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC004690.1-201ENST00000418216 328 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 KCTD10P1-201ENST00000434203 625 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 OR13K1P-201ENST00000444577 975 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC005000.1-201ENST00000536192 288 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 RPL23AP72-201ENST00000492447 435 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC074255.1-201ENST00000511259 501 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 RN7SKP147-201ENST00000517154 244 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 OR5AN2P-201ENST00000534535 896 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 YWHABP2-201ENST00000540201 713 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 AC027334.1-201ENST00000603257 310 ntBASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALMS1Q8TCU4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms