Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 CASC19-255ENST00000641733 1385 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 RN7SKP145-201ENST00000363291 303 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC023271.1-201ENST00000445936 1090 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 YRDCP3-201ENST00000456507 480 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 RPSAP37-201ENST00000470913 821 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC073610.1-201ENST00000489971 396 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC009120.1-201ENST00000493458 473 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AL117692.1-201ENST00000494283 713 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 RPS17P5-201ENST00000498293 408 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 Vault.2-201ENST00000516519 98 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC027369.2-201ENST00000528030 440 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 HMGN2P36-201ENST00000529541 409 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC068305.2-201ENST00000550567 1205 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 HSPE1P2-201ENST00000554777 306 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC006272.2-201ENST00000594725 163 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 MIR6133-201ENST00000617057 108 ntBASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLHC1Q8NHS4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.4□□□□□ -1.55
CLHC1Q8NHS4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 TET1P1-201ENST00000426627 2301 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 U3.28-201ENST00000391249 210 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AL133482.1-201ENST00000415988 498 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC118758.1-202ENST00000454719 225 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 RN7SL197P-201ENST00000466981 299 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 IGLV3-24-201ENST00000517477 197 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC006512.2-201ENST00000543250 486 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 MIR4260-201ENST00000583107 67 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC007786.3-201ENST00000615154 596 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC090607.5-201ENST00000615692 224 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 AC073592.6-201ENST00000624271 415 ntBASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLHC1Q8NHS4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms