Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 MIR551A-201ENST00000385042 96 ntBASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 RN7SKP126-201ENST00000411143 300 ntBASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 MT-RNR2-201ENST00000387347 1559 ntBASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AC126755.2-208ENST00000327792 462 ntBASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AC138969.1-213ENST00000331436 462 ntBASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 CRIP1P1-201ENST00000427567 185 ntBASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 BX679664.2-201ENST00000439282 283 ntBASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AC092647.3-201ENST00000443044 633 ntBASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AL158152.1-201ENST00000602652 1435 ntBASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 RNF138P2-201ENST00000603490 592 ntBASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP43Q8NDM7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 OR55B1P-203ENST00000641518 2602 ntBASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 RNA5SP487-201ENST00000410186 122 ntBASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 SNURFL-201ENST00000309296 343 ntBASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 RPS4XP9-201ENST00000405151 780 ntBASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AC211486.3-201ENST00000412694 621 ntBASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 USP9YP9-201ENST00000429406 715 ntBASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.53□□□□□ -1.04
CFAP43Q8NDM7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms