Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC233968.1-201ENST00000611212 1300 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC068138.1-201ENST00000412635 217 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 RPS6P23-201ENST00000413224 722 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC019205.1-201ENST00000421830 730 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AL645638.1-201ENST00000440519 361 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 VDAC2P4-201ENST00000452925 711 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 TVP23BP2-201ENST00000455082 615 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AL355032.1-201ENST00000472981 438 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 DUTP1-201ENST00000493631 470 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC072052.1-201ENST00000496556 306 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC090638.1-201ENST00000498296 909 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 PGAM1P13-201ENST00000507497 754 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC147055.1-201ENST00000509261 750 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 IGLV3-24-201ENST00000517477 197 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC090424.1-201ENST00000535243 736 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 RBM22P12-201ENST00000567098 1255 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 MTND4LP25-201ENST00000570218 163 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 BNIP3P27-201ENST00000599991 412 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC242628.1-201ENST00000606810 391 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC112503.2-201ENST00000609005 552 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE4Q8N205 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE4Q8N205 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AC022164.1-201ENST00000568767 2673 ntBASIC7.12□□□□□ -1.27
SYNE4Q8N205 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE4Q8N205 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 RNA5SP319-201ENST00000362768 119 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 SNORA56-201ENST00000383966 129 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 MIR130A-201ENST00000385274 89 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 RNU1-77P-201ENST00000390868 162 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 AL355143.1-201ENST00000407101 841 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 HMGA1P8-201ENST00000414130 321 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 SLC35E1P1-201ENST00000419313 864 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 CYCSP12-201ENST00000437729 300 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 AC006335.2-201ENST00000437993 330 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 AC015908.1-201ENST00000478739 476 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 TOMM22P4-201ENST00000511318 336 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 AC016550.3-201ENST00000515706 767 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 OR8K2P-201ENST00000524645 927 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 OR8X1P-201ENST00000534542 869 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 ELOCP28-201ENST00000590044 317 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 AL391834.2-201ENST00000609982 546 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 MAPK10-350ENST00000641777 965 ntBASIC7.11□□□□□ -1.27
SYNE4Q8N205 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNE4Q8N205 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE4Q8N205 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC011933.2-201ENST00000578539 2790 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms