Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CEACAMP11-201ENST00000455211 583 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 OR7E22P-201ENST00000478335 1035 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 NPM1P17-201ENST00000479221 602 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 SYT14P1-201ENST00000481459 721 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AP002453.1-201ENST00000492327 668 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 CR383658.1-201ENST00000514609 734 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC036111.2-201ENST00000533247 901 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 BTG1P1-201ENST00000540396 508 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AL049779.3-201ENST00000557141 606 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC018552.1-201ENST00000562099 811 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC119403.2-201ENST00000590960 598 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 SMIM12P1-201ENST00000603004 274 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AL049844.2-201ENST00000604280 628 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AL450270.1-201ENST00000606160 391 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC005972.3-201ENST00000606304 481 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AL031658.2-201ENST00000616850 651 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC090617.9-201ENST00000623751 147 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC015689.2-201ENST00000528172 1738 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC027575.3-201ENST00000583058 2747 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RNFT1P3-201ENST00000340898 1052 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 SNORA21-201ENST00000362423 132 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RNU1-134P-201ENST00000362935 165 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RNU6-666P-201ENST00000363499 107 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RNU6-225P-201ENST00000384613 103 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 SNRPEP6-201ENST00000407465 277 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 Z82198.3-201ENST00000421145 199 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC092865.3-201ENST00000425390 1026 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 USP24P1-201ENST00000433802 779 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 KF459542.1-201ENST00000450908 553 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RPL23AP23-201ENST00000452590 471 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 SDC4P-201ENST00000453285 601 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 TRBV5-2-201ENST00000489095 273 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RPL23AP73-201ENST00000492507 471 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 CDH12P2-201ENST00000504393 298 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC113367.2-201ENST00000505749 160 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC026782.2-201ENST00000510845 636 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RNU6-1308P-201ENST00000516817 103 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL078601.3-201ENST00000573303 535 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC092474.3-201ENST00000603022 568 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL645933.2-201ENST00000606743 1207 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC092681.3-201ENST00000609463 678 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL080312.2-201ENST00000613001 630 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL138960.1-201ENST00000613838 513 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 uc_338.29-201ENST00000615099 168 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC096861.1-201ENST00000616652 240 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL512652.1-201ENST00000619006 500 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 MIR6813-201ENST00000621638 56 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms