Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC093770.1-201ENST00000511559 571 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC016550.3-201ENST00000515706 767 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 HMGB1P46-201ENST00000520062 610 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC126615.2-201ENST00000553003 515 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC233266.2-201ENST00000567067 528 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC090826.1-203ENST00000569235 490 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AL163952.1-202ENST00000569625 600 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 MIR4760-201ENST00000585040 80 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 MTATP6P2-201ENST00000603319 678 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC073333.2-201ENST00000603589 769 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AL592494.3-201ENST00000609485 464 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC245389.2-201ENST00000616023 576 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC242843.1-201ENST00000618702 573 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 LINC01613-201ENST00000561476 2780 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC017002.4-201ENST00000604721 1525 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 Z86062.1-201ENST00000406773 777 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 RANP4-201ENST00000413361 655 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 NMD3P2-201ENST00000421815 761 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 MTCO2P1-201ENST00000424648 477 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 PSMD10P2-201ENST00000432890 672 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC007563.3-201ENST00000433233 371 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AL022324.2-201ENST00000434827 780 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 HMGN1P5-201ENST00000448591 263 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AL603882.1-201ENST00000463059 681 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 SCARNA1-201ENST00000517138 166 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 OSBPL9P3-201ENST00000534523 595 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC005632.2-201ENST00000564271 828 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 RN7SL66P-201ENST00000582099 264 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC011891.2-201ENST00000604949 397 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AL133481.2-203ENST00000607558 139 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC017076.1-201ENST00000607613 578 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms