Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 ENO1P4-201ENST00000416471 1785 ntBASIC8.71□□□□□ -1.01
RC3H1Q5TC82 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AL391994.1-201ENST00000254724 282 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 RN7SKP47-201ENST00000365347 328 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 RNU1-55P-201ENST00000365510 158 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 MIR181A1-201ENST00000385026 110 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 GAPDHP36-201ENST00000480688 918 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC109486.1-201ENST00000486833 374 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 ARL2BPP4-201ENST00000506854 471 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC005000.1-201ENST00000536192 288 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC013283.1-201ENST00000557282 492 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC009063.1-201ENST00000563342 702 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC116553.2-201ENST00000564203 463 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AP005119.2-201ENST00000579735 1105 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 EIF1P6-201ENST00000600054 334 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC091304.9-201ENST00000612091 226 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC107075.1-201ENST00000613695 314 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 MTCO1P18-201ENST00000455518 1419 ntBASIC8.71□□□□□ -1.02
RC3H1Q5TC82 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RC3H1Q5TC82 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 PPIAP24-201ENST00000328558 471 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 NACA3P-201ENST00000359690 648 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 Y_RNA.465-201ENST00000384293 102 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AL590004.1-201ENST00000405321 300 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 RNU6-757P-201ENST00000410334 100 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 Z97055.1-201ENST00000419730 712 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 DNAJA1P2-201ENST00000421360 1197 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 GAPDHP57-201ENST00000424400 585 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AL160175.1-201ENST00000428124 247 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 USP9YP9-201ENST00000429406 715 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC007679.3-201ENST00000434035 414 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 HSD52-202ENST00000436225 772 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 MTATP6P30-201ENST00000443540 664 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 KLF3P2-201ENST00000465138 268 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 H3F3AP5-201ENST00000475267 429 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC116337.2-201ENST00000477662 156 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AP002884.1-201ENST00000479691 655 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 MTCO3P9-201ENST00000506989 781 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms