Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AL008723.3-201ENST00000608926 449 ntBASIC8.82□□□□□ -1
CDCA8Q53HL2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.82□□□□□ -1
CDCA8Q53HL2 MIR7159-201ENST00000620587 66 ntBASIC8.82□□□□□ -1
CDCA8Q53HL2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
CDCA8Q53HL2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDCA8Q53HL2 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.82□□□□□ -1
CDCA8Q53HL2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.82□□□□□ -1
CDCA8Q53HL2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDCA8Q53HL2 SAMM50P1-201ENST00000455403 1399 ntBASIC8.82□□□□□ -1
CDCA8Q53HL2 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CDCA8Q53HL2 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDCA8Q53HL2 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDCA8Q53HL2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDCA8Q53HL2 AL132640.2-201ENST00000559968 1698 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.81□□□□□ -1
CDCA8Q53HL2 AP003486.1-201ENST00000525716 3994 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.81□□□□□ -1
CDCA8Q53HL2 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.81□□□□□ -1
CDCA8Q53HL2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 RNU4-51P-201ENST00000364206 140 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 RN7SKP237-201ENST00000364663 301 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 OR13C3-201ENST00000374781 1108 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 RNU6-1242P-201ENST00000391052 103 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 MIR1275-201ENST00000408770 80 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 RNU6-648P-201ENST00000410190 107 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.81□□□□□ -1
CDCA8Q53HL2 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 PTGES3P1-201ENST00000439531 483 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC8.81□□□□□ -1
CDCA8Q53HL2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.81□□□□□ -1
CDCA8Q53HL2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC8.81□□□□□ -1
CDCA8Q53HL2 OTX2P1-201ENST00000450956 354 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC8.81□□□□□ -1
CDCA8Q53HL2 CCNB1IP1P3-201ENST00000454702 829 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 RN7SL254P-201ENST00000460609 284 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 AC004815.1-201ENST00000484185 331 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 RPS12P31-201ENST00000491419 398 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 RN7SKP34-201ENST00000516142 244 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 RNA5SP473-201ENST00000516402 125 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.81□□□□□ -1
CDCA8Q53HL2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 HMGB1P1-201ENST00000522557 636 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.81□□□□□ -1
CDCA8Q53HL2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC8.81□□□□□ -1
CDCA8Q53HL2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.81□□□□□ -1
CDCA8Q53HL2 SETP1-201ENST00000556014 845 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 MIR4271-201ENST00000582451 67 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 DPRXP5-201ENST00000604662 539 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 MIR6721-201ENST00000617181 87 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 AC131159.1-201ENST00000621854 213 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 AL683826.1-201ENST00000624104 627 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC8.81□□□□□ -1
CDCA8Q53HL2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.81□□□□□ -1
CDCA8Q53HL2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.81□□□□□ -1
CDCA8Q53HL2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 MAPK10-365ENST00000641902 3825 ntBASIC8.81□□□□□ -1
CDCA8Q53HL2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.81□□□□□ -1
CDCA8Q53HL2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CDCA8Q53HL2 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.8□□□□□ -1
CDCA8Q53HL2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDCA8Q53HL2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDCA8Q53HL2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.8□□□□□ -1
CDCA8Q53HL2 AC053481.2-202ENST00000582394 1500 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.8□□□□□ -1
CDCA8Q53HL2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
CDCA8Q53HL2 ABCA11P-202ENST00000504019 2110 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC8.8□□□□□ -1
CDCA8Q53HL2 Y_RNA.436-201ENST00000384097 102 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.8□□□□□ -1
CDCA8Q53HL2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC8.8□□□□□ -1
CDCA8Q53HL2 RPL7AP14-201ENST00000424041 802 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.8□□□□□ -1
CDCA8Q53HL2 AC108479.1-201ENST00000431142 427 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC8.8□□□□□ -1
CDCA8Q53HL2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC8.8□□□□□ -1
CDCA8Q53HL2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC8.8□□□□□ -1
CDCA8Q53HL2 RPSAP40-201ENST00000442343 891 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.8□□□□□ -1
CDCA8Q53HL2 MORF4-201ENST00000447135 971 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 AL096803.2-201ENST00000450032 677 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.8□□□□□ -1
CDCA8Q53HL2 OR52E7P-201ENST00000452394 933 ntBASIC8.8□□□□□ -1
CDCA8Q53HL2 CST12P-201ENST00000457644 362 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms