Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC108865.2-201ENST00000606881 432 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC109809.1-201ENST00000619665 545 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC007159.1-201ENST00000566529 4706 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 LYARP1-201ENST00000436977 1501 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AL021877.2-201ENST00000624442 10684 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 NXF4-202ENST00000416098 1465 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 RNU6-666P-201ENST00000363499 107 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 SNORA70.9-201ENST00000384370 135 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 MIR137-201ENST00000385223 102 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 RN7SKP281-201ENST00000410472 352 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 SOCS5P1-201ENST00000440415 949 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AL031313.1-201ENST00000448435 256 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 PSMC1P13-201ENST00000458195 985 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC068228.1-201ENST00000461723 211 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC138866.2-201ENST00000508650 584 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC147055.3-201ENST00000510547 851 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC084337.1-201ENST00000524809 686 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC073916.1-201ENST00000545095 130 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 AC022079.2-201ENST00000619739 566 ntBASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC144BQ3MJ40 RLIMP2-201ENST00000427891 1563 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 DOCK11P1-201ENST00000553480 5932 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC062022.1-201ENST00000451026 1684 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 RNU1-46P-201ENST00000384425 164 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 GAPDHP15-201ENST00000398586 975 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC010385.1-201ENST00000412374 256 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC105402.1-201ENST00000413336 545 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC008280.2-201ENST00000455473 307 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC107015.1-201ENST00000466902 747 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms