Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 SAMMSON-209ENST00000641222 1100 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
GABPAQ06546 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.51□□□□□ -1.37
GABPAQ06546 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.51□□□□□ -1.37
GABPAQ06546 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 HSPD1P7-201ENST00000447985 1686 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
GABPAQ06546 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 AL158152.1-201ENST00000602652 1435 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GABPAQ06546 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 SNORA58B-201ENST00000364259 136 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GABPAQ06546 RN7SKP273-201ENST00000411392 314 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.5□□□□□ -1.37
GABPAQ06546 SRSF1P1-201ENST00000424058 520 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 TMEM183AP1-205ENST00000432739 290 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 RN7SL172P-201ENST00000460535 303 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 AC008410.1-201ENST00000483777 339 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 RNA5SP116-201ENST00000516132 98 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 IGLV2-28-201ENST00000520681 304 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 AL049779.2-201ENST00000553847 315 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 WBP1LP8-201ENST00000617401 327 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.5□□□□□ -1.37
GABPAQ06546 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
GABPAQ06546 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 AC020656.2-201ENST00000613291 5309 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.5□□□□□ -1.37
GABPAQ06546 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABPAQ06546 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.5□□□□□ -1.37
GABPAQ06546 MTND5P12-201ENST00000502851 1449 ntBASIC6.5□□□□□ -1.37
GABPAQ06546 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.49□□□□□ -1.37
GABPAQ06546 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 RNU4-34P-201ENST00000410431 124 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 MTND4LP17-201ENST00000414607 293 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.49□□□□□ -1.37
GABPAQ06546 AL139148.1-201ENST00000427122 680 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 DSTNP5-201ENST00000427921 523 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 EEF1B2P5-201ENST00000444820 548 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC079841.1-201ENST00000481228 950 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AC072052.1-201ENST00000496556 306 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 HIGD1AP14-201ENST00000507617 282 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 CDC42P3-201ENST00000518493 633 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.49□□□□□ -1.37
GABPAQ06546 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.49□□□□□ -1.37
GABPAQ06546 H3F3BP2-201ENST00000583907 357 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC060780.2-201ENST00000589047 198 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.49□□□□□ -1.37
GABPAQ06546 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC009237.13-201ENST00000603193 276 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 AC109583.2-201ENST00000617367 129 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.49□□□□□ -1.37
GABPAQ06546 AC021766.1-201ENST00000624404 741 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.49□□□□□ -1.37
GABPAQ06546 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.49□□□□□ -1.37
GABPAQ06546 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.49□□□□□ -1.37
GABPAQ06546 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms