Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 MFSD8-219ENST00000641228 2559 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC011755.1-201ENST00000623763 2049 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RN7SKP77-201ENST00000363261 353 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RN7SKP78-201ENST00000364711 318 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RNA5SP91-201ENST00000390902 119 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC016739.1-201ENST00000405359 345 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RNU2-18P-201ENST00000411224 162 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RPS14P4-201ENST00000415880 418 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 OR13Z1P-201ENST00000416141 834 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 SETP10-201ENST00000424368 814 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RBMY2AP-201ENST00000445405 1157 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RBMY2CP-201ENST00000448575 1157 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RBMY2DP-202ENST00000448881 1157 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RBMY2BP-202ENST00000451071 1156 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC004129.2-201ENST00000457229 287 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RN7SL269P-201ENST00000467795 305 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC021006.1-201ENST00000489849 553 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC105384.2-201ENST00000508433 640 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC009879.1-201ENST00000520029 839 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 MIR744-201ENST00000578242 98 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AP005119.1-201ENST00000580956 292 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC145423.1-201ENST00000605712 336 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC092266.1-201ENST00000610958 165 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 TMEM30CP-203ENST00000637814 1035 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 SAMMSON-227ENST00000642114 1199 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 THAP12P5-201ENST00000405864 2275 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 BTBD10P1-201ENST00000549824 1352 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 MTND5P12-201ENST00000502851 1449 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC093225.1-201ENST00000506867 1408 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 AC097461.1-201ENST00000568928 2821 ntBASIC4.35□□□□□ -1.71
HIST1H1AQ02539 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.35□□□□□ -1.71
HIST1H1AQ02539 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 SNORA51.9-201ENST00000384295 124 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 MIR130B-202ENST00000385018 82 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 RNU2-22P-201ENST00000411266 212 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 CTSL3P-202ENST00000412179 788 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 KIF4CP-201ENST00000422742 1279 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 PRUNEP1-201ENST00000425846 705 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 ATP5LP2-201ENST00000440646 311 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC097463.1-201ENST00000447288 481 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC005077.1-201ENST00000449226 375 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 SNORD125-201ENST00000459538 96 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 GAPDHP71-201ENST00000511530 1003 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 RN7SKP35-201ENST00000517210 151 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AL390726.5-202ENST00000564800 256 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 ARGFXP2-201ENST00000579304 949 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 MIR4776-2-201ENST00000580204 80 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms