Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AL662795.2-201ENST00000624252 3706 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC096992.2-201ENST00000609553 1684 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC093297.3-201ENST00000607056 2517 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 SEC63P2-201ENST00000503863 1939 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NKX6-1P78426 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 RNA5SP279-201ENST00000365513 117 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AL451142.1-201ENST00000375867 775 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 SNORD116-12-201ENST00000384468 92 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AL136131.1-201ENST00000406079 803 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX6-1P78426 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 RN7SKP129-201ENST00000410288 299 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 RN7SKP240-201ENST00000410583 375 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 RNU2-22P-201ENST00000411266 212 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX6-1P78426 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 MTCO1P52-201ENST00000433928 531 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC073052.1-201ENST00000440417 714 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 CRYGGP-201ENST00000443337 145 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 SNRPBP1-201ENST00000443634 282 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 HMGB3P6-201ENST00000444896 598 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 HMGN1P2-201ENST00000445197 310 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 PFN1P11-201ENST00000445829 389 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AL451063.1-201ENST00000450164 1133 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 NAP1L1P3-201ENST00000462291 880 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 RN7SL382P-201ENST00000482631 282 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX6-1P78426 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX6-1P78426 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC006512.2-201ENST00000543250 486 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX6-1P78426 MRPS36P5-201ENST00000551909 298 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AL845552.1-201ENST00000556820 323 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AC095057.3-201ENST00000567102 1157 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC063977.7-201ENST00000594454 337 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 GAS5-AS1-201ENST00000602767 694 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AC091768.1-201ENST00000609258 930 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 MIR6862-1-201ENST00000613016 70 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 MIR6862-2-201ENST00000614755 70 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AL356274.1-201ENST00000617064 410 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AC073862.4-201ENST00000622982 854 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX6-1P78426 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 QRSL1P1-201ENST00000400977 1540 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX6-1P78426 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX6-1P78426 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.82□□□□□ -1.48
NKX6-1P78426 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NKX6-1P78426 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NKX6-1P78426 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX6-1P78426 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
NKX6-1P78426 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NKX6-1P78426 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 RNA5SP485-201ENST00000365053 119 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 RNU1-55P-201ENST00000365510 158 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms