Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.72□□□□□ -1.65
LMO4P61968 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.72□□□□□ -1.65
LMO4P61968 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.72□□□□□ -1.65
LMO4P61968 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.72□□□□□ -1.65
LMO4P61968 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.72□□□□□ -1.65
LMO4P61968 HSPE1P2-201ENST00000554777 306 ntBASIC4.72□□□□□ -1.65
LMO4P61968 AC067805.1-201ENST00000559344 470 ntBASIC4.72□□□□□ -1.65
LMO4P61968 AL158211.1-201ENST00000566763 763 ntBASIC4.72□□□□□ -1.65
LMO4P61968 MRPS21P7-201ENST00000566937 238 ntBASIC4.72□□□□□ -1.65
LMO4P61968 OR7E18P-201ENST00000592589 702 ntBASIC4.72□□□□□ -1.65
LMO4P61968 AC006115.2-201ENST00000596823 202 ntBASIC4.72□□□□□ -1.65
LMO4P61968 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.72□□□□□ -1.65
LMO4P61968 AP005131.7-201ENST00000610087 611 ntBASIC4.72□□□□□ -1.65
LMO4P61968 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.72□□□□□ -1.65
LMO4P61968 AC107905.1-201ENST00000616204 426 ntBASIC4.72□□□□□ -1.65
LMO4P61968 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
LMO4P61968 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LMO4P61968 CR382285.2-201ENST00000624662 1495 ntBASIC4.72□□□□□ -1.65
LMO4P61968 MFSD8-239ENST00000641590 2479 ntBASIC4.72□□□□□ -1.65
LMO4P61968 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LMO4P61968 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LMO4P61968 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LMO4P61968 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LMO4P61968 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC4.72□□□□□ -1.65
LMO4P61968 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
LMO4P61968 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
LMO4P61968 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.71□□□□□ -1.65
LMO4P61968 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.71□□□□□ -1.65
LMO4P61968 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.71□□□□□ -1.65
LMO4P61968 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.65
LMO4P61968 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
LMO4P61968 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LMO4P61968 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 AL034546.1-201ENST00000623740 3693 ntBASIC4.71□□□□□ -1.66
LMO4P61968 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 AC011504.1-201ENST00000623331 4103 ntBASIC4.71□□□□□ -1.66
LMO4P61968 MTHFD2P5-201ENST00000320415 844 ntBASIC4.71□□□□□ -1.66
LMO4P61968 OR9K1P-201ENST00000326513 941 ntBASIC4.71□□□□□ -1.66
LMO4P61968 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 SNORD1C-201ENST00000363315 78 ntBASIC4.71□□□□□ -1.66
LMO4P61968 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 RN7SKP278-201ENST00000410504 342 ntBASIC4.71□□□□□ -1.66
LMO4P61968 RN7SKP59-201ENST00000410520 314 ntBASIC4.71□□□□□ -1.66
LMO4P61968 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.71□□□□□ -1.66
LMO4P61968 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.71□□□□□ -1.66
LMO4P61968 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 MYO5BP2-201ENST00000449815 1277 ntBASIC4.71□□□□□ -1.66
LMO4P61968 RANP1-206ENST00000455094 651 ntBASIC4.71□□□□□ -1.66
LMO4P61968 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.71□□□□□ -1.66
LMO4P61968 AC011225.1-201ENST00000457751 369 ntBASIC4.71□□□□□ -1.66
LMO4P61968 RPS23P2-201ENST00000463671 415 ntBASIC4.71□□□□□ -1.66
LMO4P61968 AC100832.1-201ENST00000471945 383 ntBASIC4.71□□□□□ -1.66
LMO4P61968 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 AC016687.1-201ENST00000482574 353 ntBASIC4.71□□□□□ -1.66
LMO4P61968 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.71□□□□□ -1.66
LMO4P61968 EIF1P7-201ENST00000487533 337 ntBASIC4.71□□□□□ -1.66
LMO4P61968 RN7SL547P-201ENST00000490793 290 ntBASIC4.71□□□□□ -1.66
LMO4P61968 RPL37AP8-201ENST00000494116 276 ntBASIC4.71□□□□□ -1.66
LMO4P61968 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.71□□□□□ -1.66
LMO4P61968 AC026688.1-201ENST00000520639 1168 ntBASIC4.71□□□□□ -1.66
LMO4P61968 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LMO4P61968 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.71□□□□□ -1.66
LMO4P61968 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LMO4P61968 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 AC090330.1-201ENST00000588646 764 ntBASIC4.71□□□□□ -1.66
LMO4P61968 AC005229.3-201ENST00000603438 323 ntBASIC4.71□□□□□ -1.66
LMO4P61968 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 AC023510.2-201ENST00000622162 746 ntBASIC4.71□□□□□ -1.66
LMO4P61968 AC090506.2-201ENST00000624521 419 ntBASIC4.71□□□□□ -1.66
LMO4P61968 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LMO4P61968 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 BX284613.1-201ENST00000452221 1641 ntBASIC4.71□□□□□ -1.66
LMO4P61968 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMO4P61968 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 CUL4AP1-201ENST00000514750 1863 ntBASIC4.71□□□□□ -1.66
LMO4P61968 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms