Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.01□□□□□ -1.77
CKS1BP61024 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS1BP61024 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS1BP61024 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS1BP61024 MIR708-201ENST00000390708 88 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 YWHAZP4-201ENST00000392459 708 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 Z68694.1-201ENST00000413929 841 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC002127.1-201ENST00000421305 225 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 GTF2IP2-201ENST00000424290 697 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 OSTCP4-201ENST00000424397 449 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 GAPDHP37-201ENST00000442317 968 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 CXCR2P1-202ENST00000443392 1074 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS1BP61024 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 PFN1P6-201ENST00000476786 399 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 RPL12P31-201ENST00000478433 450 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 RN7SL214P-201ENST00000487317 265 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 AP002981.1-201ENST00000517692 975 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC134698.5-201ENST00000519444 336 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.01□□□□□ -1.77
CKS1BP61024 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 AC135983.3-201ENST00000528049 1226 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC084851.2-201ENST00000530377 364 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC124891.1-201ENST00000536322 519 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.01□□□□□ -1.77
CKS1BP61024 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 NIFKP4-201ENST00000567275 1192 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
CKS1BP61024 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.01□□□□□ -1.77
CKS1BP61024 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.01□□□□□ -1.77
CKS1BP61024 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 AC100832.2-201ENST00000582080 776 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC026898.1-201ENST00000586404 571 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AL133481.2-203ENST00000607558 139 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC025574.2-201ENST00000615621 514 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.01□□□□□ -1.77
CKS1BP61024 MIR6133-201ENST00000617057 108 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 AC099654.15-201ENST00000639802 509 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS1BP61024 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 AP004607.3-201ENST00000530354 3915 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC005224.3-201ENST00000584683 2140 ntBASIC4□□□□□ -1.77
CKS1BP61024 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4□□□□□ -1.77
CKS1BP61024 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 RNU105B-201ENST00000364478 208 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC092634.1-201ENST00000366505 199 ntBASIC4□□□□□ -1.77
CKS1BP61024 MIR1266-201ENST00000408125 84 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4□□□□□ -1.77
CKS1BP61024 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 RPS15AP30-201ENST00000420976 390 ntBASIC4□□□□□ -1.77
CKS1BP61024 RPS12P5-201ENST00000423449 371 ntBASIC4□□□□□ -1.77
CKS1BP61024 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4□□□□□ -1.77
CKS1BP61024 AC106901.1-201ENST00000425086 698 ntBASIC4□□□□□ -1.77
CKS1BP61024 RPS7P14-201ENST00000426405 583 ntBASIC4□□□□□ -1.77
CKS1BP61024 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 AC234771.4-201ENST00000441416 730 ntBASIC4□□□□□ -1.77
CKS1BP61024 RSU1P1-201ENST00000453416 441 ntBASIC4□□□□□ -1.77
CKS1BP61024 AL034369.1-201ENST00000453808 477 ntBASIC4□□□□□ -1.77
CKS1BP61024 RN7SL39P-201ENST00000462264 297 ntBASIC4□□□□□ -1.77
CKS1BP61024 AL603882.1-201ENST00000463059 681 ntBASIC4□□□□□ -1.77
CKS1BP61024 CREM-230ENST00000474931 626 ntTSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 RN7SL267P-201ENST00000485107 261 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC090638.1-201ENST00000498296 909 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4□□□□□ -1.77
CKS1BP61024 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4□□□□□ -1.77
CKS1BP61024 NREP-217ENST00000509025 987 ntTSL 3 BASIC4□□□□□ -1.77
CKS1BP61024 PGBD4P4-201ENST00000509673 613 ntBASIC4□□□□□ -1.77
CKS1BP61024 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 AC093664.1-201ENST00000511779 289 ntBASIC4□□□□□ -1.77
CKS1BP61024 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 NREP-223ENST00000515855 801 ntTSL 4 BASIC4□□□□□ -1.77
CKS1BP61024 RNA5SP464-201ENST00000516251 108 ntBASIC4□□□□□ -1.77
CKS1BP61024 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 OR4A42P-201ENST00000531397 938 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms