Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 AL139041.1-201ENST00000605480 610 ntBASIC4.8□□□□□ -1.64
CLDN12P56749 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN12P56749 AC007603.3-201ENST00000636915 979 ntBASIC4.8□□□□□ -1.64
CLDN12P56749 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.8□□□□□ -1.64
CLDN12P56749 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN12P56749 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN12P56749 QRSL1P1-201ENST00000400977 1540 ntBASIC4.8□□□□□ -1.64
CLDN12P56749 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN12P56749 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN12P56749 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN12P56749 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN12P56749 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN12P56749 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN12P56749 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN12P56749 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CLDN12P56749 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLDN12P56749 AF287957.1-201ENST00000607368 1595 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN12P56749 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN12P56749 SNORA51.9-201ENST00000384295 124 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 RN7SKP146-201ENST00000410242 334 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 RN7SKP38-201ENST00000410782 309 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN12P56749 AC126120.1-201ENST00000431082 470 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 RPSAP32-201ENST00000432681 526 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 TUBB4BP6-201ENST00000437576 479 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 AC092106.1-201ENST00000444291 373 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN12P56749 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN12P56749 AL596266.1-201ENST00000448132 400 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 RN7SL254P-201ENST00000460609 284 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 RPS27P20-201ENST00000492051 246 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN12P56749 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN12P56749 HMGN1P9-201ENST00000515212 298 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 SCARNA6.1-201ENST00000516989 238 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 TMEM97P2-201ENST00000517841 403 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 AC021678.3-201ENST00000517893 476 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN12P56749 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN12P56749 WBP1LP3-201ENST00000523033 208 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN12P56749 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN12P56749 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN12P56749 NMNAT1P5-201ENST00000559657 841 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN12P56749 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN12P56749 FAM72A-208ENST00000607379 1139 ntBASIC4.79□□□□□ -1.64
CLDN12P56749 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN12P56749 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN12P56749 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN12P56749 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN12P56749 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN12P56749 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN12P56749 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN12P56749 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN12P56749 PDZK1P1-202ENST00000425209 1350 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN12P56749 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN12P56749 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN12P56749 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN12P56749 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLDN12P56749 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN12P56749 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN12P56749 SEPT7P2-202ENST00000398921 823 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AL136455.1-201ENST00000441083 1240 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 HMGB1P7-201ENST00000450921 612 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC004890.1-201ENST00000461005 181 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC005165.2-201ENST00000466070 380 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 RPSAP37-201ENST00000470913 821 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC009120.1-201ENST00000493458 473 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC023424.1-201ENST00000496058 459 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 AC113367.2-201ENST00000505749 160 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN12P56749 RNU6-513P-201ENST00000516104 104 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms