Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 MT1CP-201ENST00000567054 174 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AC007346.1-201ENST00000569208 867 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.77□□□□□ -1.49
SUMO3P55854 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC234772.3-201ENST00000602277 528 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 PART1_2.1-201ENST00000612397 250 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AC024255.1-201ENST00000614376 102 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC145207.9-201ENST00000623802 325 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AC021106.3-201ENST00000623925 531 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 OR7E91P-202ENST00000642062 1198 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 CASC19-243ENST00000641588 1546 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
SUMO3P55854 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 Z93929.1-201ENST00000418200 1475 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.76□□□□□ -1.49
SUMO3P55854 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SUMO3P55854 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 SNORD65C-201ENST00000390962 71 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 HMGB3P7-201ENST00000400214 611 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 SSR1P2-201ENST00000415208 787 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 RPL36P18-201ENST00000419316 318 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 AC092648.1-201ENST00000425870 423 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 RPSAP32-201ENST00000432681 526 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 MRPS21P3-201ENST00000436696 262 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 LDHAP2-201ENST00000437325 985 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 COX4I1P2-201ENST00000447446 547 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 VPS25P1-201ENST00000455691 508 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 RPL7P32-201ENST00000457119 744 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 RN7SL165P-201ENST00000477476 291 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 RPL12P31-201ENST00000478433 450 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 FTH1P8-201ENST00000498161 514 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 RNA5SP400-201ENST00000517155 111 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 AC104417.1-201ENST00000523974 751 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 NDUFA5P11-201ENST00000567995 343 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.76□□□□□ -1.49
SUMO3P55854 ARGFXP2-201ENST00000579304 949 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 DYNLL1P1-201ENST00000595442 269 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AC022022.2-201ENST00000602989 360 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 RPL12P48-201ENST00000605620 304 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AL645933.2-201ENST00000606743 1207 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 AC024060.1-201ENST00000607052 494 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 HTR1DP1-201ENST00000616500 888 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.76□□□□□ -1.49
SUMO3P55854 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.76□□□□□ -1.49
SUMO3P55854 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms