Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 RNGTTP1-201ENST00000420965 728 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC017019.1-201ENST00000426129 261 ntBASIC5.6□□□□□ -1.51
CDH13P55290 NPM1P26-201ENST00000426339 738 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AL590623.1-201ENST00000427864 105 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC138761.5-201ENST00000433967 325 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 SNRPFP2-201ENST00000440710 251 ntBASIC5.6□□□□□ -1.51
CDH13P55290 RPL6P30-201ENST00000443382 862 ntBASIC5.6□□□□□ -1.51
CDH13P55290 MEMO1P4-201ENST00000453590 386 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC099521.1-201ENST00000482557 334 ntBASIC5.6□□□□□ -1.51
CDH13P55290 RPS7P6-201ENST00000485777 579 ntBASIC5.6□□□□□ -1.51
CDH13P55290 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH13P55290 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH13P55290 MTND2P31-201ENST00000512602 616 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CDH13P55290 PRMT5P1-201ENST00000514351 598 ntBASIC5.6□□□□□ -1.51
CDH13P55290 RNA5SP340-201ENST00000517132 107 ntBASIC5.6□□□□□ -1.51
CDH13P55290 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 AC139365.2-201ENST00000517972 253 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 AC137627.1-201ENST00000545761 289 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC006530.1-201ENST00000555980 571 ntBASIC5.6□□□□□ -1.51
CDH13P55290 RPA2P1-201ENST00000556557 721 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 AC138207.8-204ENST00000579588 527 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 LSM1P2-201ENST00000604911 322 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH13P55290 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH13P55290 AC009962.1-201ENST00000567327 3813 ntBASIC5.6□□□□□ -1.51
CDH13P55290 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
CDH13P55290 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 AL442128.2-201ENST00000620246 1824 ntBASIC5.6□□□□□ -1.51
CDH13P55290 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDH13P55290 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDH13P55290 AC068870.1-201ENST00000563737 2455 ntBASIC5.59□□□□□ -1.51
CDH13P55290 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH13P55290 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDH13P55290 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDH13P55290 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CDH13P55290 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDH13P55290 AC022417.1-201ENST00000624768 1303 ntBASIC5.59□□□□□ -1.51
CDH13P55290 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDH13P55290 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH13P55290 OR56A4-201ENST00000330728 1209 ntBASIC5.59□□□□□ -1.51
CDH13P55290 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AL357752.1-201ENST00000412817 349 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AC019205.1-201ENST00000421830 730 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AL356806.1-201ENST00000422524 916 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH13P55290 VTI1BP4-201ENST00000427516 527 ntBASIC5.59□□□□□ -1.51
CDH13P55290 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 TUBB4BP6-201ENST00000437576 479 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 AL606490.8-201ENST00000441624 319 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 MORF4L1P4-201ENST00000450245 976 ntBASIC5.59□□□□□ -1.51
CDH13P55290 CST12P-201ENST00000457644 362 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH13P55290 RN7SL57P-201ENST00000493687 290 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AK4P6-201ENST00000505168 528 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 HSD3BP3-201ENST00000514706 994 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AP002981.1-201ENST00000517692 975 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AC087272.1-201ENST00000523624 533 ntBASIC5.59□□□□□ -1.51
CDH13P55290 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.59□□□□□ -1.51
CDH13P55290 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH13P55290 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH13P55290 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH13P55290 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH13P55290 AC245014.3-201ENST00000618589 347 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms