Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL121839.2-201ENST00000565058 6943 ntBASIC5.73□□□□□ -1.49
LIMK2P53671 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LIMK2P53671 MIPEPP2-201ENST00000422560 1819 ntBASIC5.73□□□□□ -1.49
LIMK2P53671 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK2P53671 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LIMK2P53671 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.73□□□□□ -1.49
LIMK2P53671 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
LIMK2P53671 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK2P53671 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.73□□□□□ -1.49
LIMK2P53671 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK2P53671 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 AL592429.1-201ENST00000403909 1473 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 RNA5SP500-201ENST00000364486 119 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 MIR143-201ENST00000385300 106 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 RN7SKP29-201ENST00000410957 272 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK2P53671 NFYAP1-201ENST00000431953 972 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 NPM1P18-201ENST00000434232 732 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK2P53671 GAPDHP48-201ENST00000436626 961 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 MTND2P40-201ENST00000436718 841 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 SUMO2P3-201ENST00000438311 288 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK2P53671 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK2P53671 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 DUTP1-201ENST00000493631 470 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.72□□□□□ -1.49
LIMK2P53671 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK2P53671 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK2P53671 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 AP000619.2-201ENST00000546014 969 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AC022404.1-201ENST00000555320 273 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.72□□□□□ -1.49
LIMK2P53671 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.72□□□□□ -1.49
LIMK2P53671 AC010547.6-201ENST00000571789 193 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK2P53671 AC022467.1-201ENST00000614738 749 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK2P53671 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.72□□□□□ -1.49
LIMK2P53671 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK2P53671 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK2P53671 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK2P53671 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK2P53671 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK2P53671 HSPD1P7-201ENST00000447985 1686 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 AC026523.2-201ENST00000625039 7739 ntBASIC5.72□□□□□ -1.49
LIMK2P53671 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LIMK2P53671 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LIMK2P53671 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LIMK2P53671 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
LIMK2P53671 AC120036.2-201ENST00000509729 1474 ntBASIC5.71□□□□□ -1.49
LIMK2P53671 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
LIMK2P53671 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
LIMK2P53671 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK2P53671 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK2P53671 NLRP3P1-201ENST00000622303 1785 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK2P53671 BCORP1-203ENST00000513194 5093 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK2P53671 RN7SKP145-201ENST00000363291 303 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LIMK2P53671 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LIMK2P53671 U3.25-201ENST00000391209 220 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 NPM1P38-201ENST00000403835 865 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AL357752.1-201ENST00000412817 349 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 Z68694.1-201ENST00000413929 841 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK2P53671 AL513325.1-201ENST00000417716 1034 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AK4P4-201ENST00000419465 646 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AL354766.1-201ENST00000423396 542 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.71□□□□□ -1.5
LIMK2P53671 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.71□□□□□ -1.5
LIMK2P53671 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.71□□□□□ -1.5
LIMK2P53671 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK2P53671 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.71□□□□□ -1.5
LIMK2P53671 RPS23P2-201ENST00000463671 415 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AC074386.1-201ENST00000476560 767 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 NENFP3-201ENST00000503735 313 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK2P53671 AC074255.1-201ENST00000511259 501 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms