Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC092070.2-203ENST00000598377 3644 ntBASIC5.8□□□□□ -1.48
HTTP42858 OR4K15-201ENST00000305051 1216 ntBASIC5.8□□□□□ -1.48
HTTP42858 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
HTTP42858 MIR600-201ENST00000385007 98 ntBASIC5.8□□□□□ -1.48
HTTP42858 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.8□□□□□ -1.48
HTTP42858 AL592293.2-201ENST00000422292 996 ntBASIC5.8□□□□□ -1.48
HTTP42858 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.8□□□□□ -1.48
HTTP42858 RPS29P10-201ENST00000439197 166 ntBASIC5.8□□□□□ -1.48
HTTP42858 AC109464.1-201ENST00000511091 819 ntBASIC5.8□□□□□ -1.48
HTTP42858 RNA5SP143-201ENST00000516936 115 ntBASIC5.8□□□□□ -1.48
HTTP42858 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HTTP42858 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC5.8□□□□□ -1.48
HTTP42858 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC5.8□□□□□ -1.48
HTTP42858 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.8□□□□□ -1.48
HTTP42858 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
HTTP42858 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.8□□□□□ -1.48
HTTP42858 RNU1-136P-201ENST00000384181 164 ntBASIC5.8□□□□□ -1.48
HTTP42858 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.8□□□□□ -1.48
HTTP42858 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.8□□□□□ -1.48
HTTP42858 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.8□□□□□ -1.48
HTTP42858 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.8□□□□□ -1.48
HTTP42858 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.8□□□□□ -1.48
HTTP42858 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.8□□□□□ -1.48
HTTP42858 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC5.79□□□□□ -1.48
HTTP42858 AC099654.2-201ENST00000433031 1980 ntBASIC5.79□□□□□ -1.48
HTTP42858 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 AC025750.1-201ENST00000399891 379 ntBASIC5.79□□□□□ -1.48
HTTP42858 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.79□□□□□ -1.48
HTTP42858 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.79□□□□□ -1.48
HTTP42858 BX510359.2-201ENST00000417920 305 ntBASIC5.79□□□□□ -1.48
HTTP42858 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.79□□□□□ -1.48
HTTP42858 AC091912.1-201ENST00000511351 248 ntBASIC5.79□□□□□ -1.48
HTTP42858 RNA5SP464-201ENST00000516251 108 ntBASIC5.79□□□□□ -1.48
HTTP42858 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.79□□□□□ -1.48
HTTP42858 AP005119.2-201ENST00000579735 1105 ntBASIC5.79□□□□□ -1.48
HTTP42858 AC020915.5-201ENST00000596836 964 ntBASIC5.79□□□□□ -1.48
HTTP42858 SNORD91A-202ENST00000609620 191 ntBASIC5.79□□□□□ -1.48
HTTP42858 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HTTP42858 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HTTP42858 AC119674.1-213ENST00000641177 1386 ntBASIC5.79□□□□□ -1.48
HTTP42858 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HTTP42858 AC097063.1-201ENST00000426714 1797 ntBASIC5.79□□□□□ -1.48
HTTP42858 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 SAMMSON-226ENST00000642089 1582 ntBASIC5.79□□□□□ -1.48
HTTP42858 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HTTP42858 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.79□□□□□ -1.48
HTTP42858 FTH1P10-202ENST00000430907 550 ntBASIC5.79□□□□□ -1.48
HTTP42858 RPS29P9-201ENST00000440360 171 ntBASIC5.79□□□□□ -1.48
HTTP42858 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.79□□□□□ -1.48
HTTP42858 AC020593.1-201ENST00000507399 299 ntBASIC5.79□□□□□ -1.48
HTTP42858 AC245389.1-201ENST00000605141 529 ntBASIC5.79□□□□□ -1.48
HTTP42858 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.79□□□□□ -1.48
HTTP42858 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HTTP42858 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HTTP42858 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC5.79□□□□□ -1.48
HTTP42858 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.79□□□□□ -1.48
HTTP42858 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.79□□□□□ -1.48
HTTP42858 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.79□□□□□ -1.48
HTTP42858 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.79□□□□□ -1.48
HTTP42858 RPL12P25-202ENST00000598100 674 ntBASIC5.79□□□□□ -1.48
HTTP42858 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.79□□□□□ -1.48
HTTP42858 MIR8089-201ENST00000620165 82 ntBASIC5.79□□□□□ -1.48
HTTP42858 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.79□□□□□ -1.48
HTTP42858 MTCO1P15-201ENST00000529569 1526 ntBASIC5.79□□□□□ -1.48
HTTP42858 MAPK10-270ENST00000641102 3538 ntBASIC5.78□□□□□ -1.48
HTTP42858 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 SNORD113.2-201ENST00000364166 89 ntBASIC5.78□□□□□ -1.48
HTTP42858 RPL7P57-201ENST00000423238 740 ntBASIC5.78□□□□□ -1.48
HTTP42858 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.78□□□□□ -1.48
HTTP42858 AC122688.1-201ENST00000541494 223 ntBASIC5.78□□□□□ -1.48
HTTP42858 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HTTP42858 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.78□□□□□ -1.48
HTTP42858 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
HTTP42858 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
HTTP42858 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms