Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.28□□□□□ -1.56
RFC3P40938 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RFC3P40938 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC3P40938 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RFC3P40938 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
RFC3P40938 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 RNA5SP46-201ENST00000362370 120 ntBASIC5.27□□□□□ -1.57
RFC3P40938 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RFC3P40938 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.27□□□□□ -1.57
RFC3P40938 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 AC015977.1-201ENST00000418887 292 ntBASIC5.27□□□□□ -1.57
RFC3P40938 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 BX276092.6-201ENST00000430476 250 ntBASIC5.27□□□□□ -1.57
RFC3P40938 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC3P40938 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 AC073909.1-201ENST00000447112 999 ntBASIC5.27□□□□□ -1.57
RFC3P40938 LRRC37A14P-201ENST00000452297 462 ntBASIC5.27□□□□□ -1.57
RFC3P40938 BX276092.8-201ENST00000455722 250 ntBASIC5.27□□□□□ -1.57
RFC3P40938 RPS27AP2-201ENST00000457576 465 ntBASIC5.27□□□□□ -1.57
RFC3P40938 RPS26P39-201ENST00000469206 341 ntBASIC5.27□□□□□ -1.57
RFC3P40938 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 AC009120.1-201ENST00000493458 473 ntBASIC5.27□□□□□ -1.57
RFC3P40938 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 AC138866.2-201ENST00000508650 584 ntBASIC5.27□□□□□ -1.57
RFC3P40938 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 ASNSP4-201ENST00000511103 447 ntBASIC5.27□□□□□ -1.57
RFC3P40938 AC074087.1-201ENST00000512059 724 ntBASIC5.27□□□□□ -1.57
RFC3P40938 RNU6-615P-201ENST00000516065 106 ntBASIC5.27□□□□□ -1.57
RFC3P40938 AC139365.2-201ENST00000517972 253 ntBASIC5.27□□□□□ -1.57
RFC3P40938 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.27□□□□□ -1.57
RFC3P40938 AC010503.3-201ENST00000594355 540 ntBASIC5.27□□□□□ -1.57
RFC3P40938 AC006363.1-201ENST00000603806 463 ntBASIC5.27□□□□□ -1.57
RFC3P40938 AL589674.2-201ENST00000604304 337 ntBASIC5.27□□□□□ -1.57
RFC3P40938 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC3P40938 AC008115.3-201ENST00000614874 549 ntBASIC5.27□□□□□ -1.57
RFC3P40938 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 AC138965.3-201ENST00000623875 498 ntBASIC5.27□□□□□ -1.57
RFC3P40938 AL691477.1-201ENST00000624398 162 ntBASIC5.27□□□□□ -1.57
RFC3P40938 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 OR9K1P-202ENST00000641111 3217 ntBASIC5.27□□□□□ -1.57
RFC3P40938 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC3P40938 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RFC3P40938 AC068870.3-201ENST00000625077 2536 ntBASIC5.27□□□□□ -1.57
RFC3P40938 AC097063.1-201ENST00000426714 1797 ntBASIC5.27□□□□□ -1.57
RFC3P40938 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC3P40938 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.26□□□□□ -1.57
RFC3P40938 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 HSPA8P14-201ENST00000552265 1805 ntBASIC5.26□□□□□ -1.57
RFC3P40938 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.26□□□□□ -1.57
RFC3P40938 RN7SKP293-201ENST00000411389 296 ntBASIC5.26□□□□□ -1.57
RFC3P40938 MGAT2P2-201ENST00000427194 797 ntBASIC5.26□□□□□ -1.57
RFC3P40938 FMO7P-201ENST00000436045 768 ntBASIC5.26□□□□□ -1.57
RFC3P40938 GAPDHP48-201ENST00000436626 961 ntBASIC5.26□□□□□ -1.57
RFC3P40938 Z84478.1-201ENST00000438230 1219 ntBASIC5.26□□□□□ -1.57
RFC3P40938 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 RN7SL177P-201ENST00000476596 299 ntBASIC5.26□□□□□ -1.57
RFC3P40938 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.26□□□□□ -1.57
RFC3P40938 RN7SL466P-201ENST00000497546 295 ntBASIC5.26□□□□□ -1.57
RFC3P40938 RPS26P24-201ENST00000497656 331 ntBASIC5.26□□□□□ -1.57
RFC3P40938 DUTP7-201ENST00000507982 486 ntBASIC5.26□□□□□ -1.57
RFC3P40938 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC3P40938 AC027026.1-201ENST00000532323 742 ntBASIC5.26□□□□□ -1.57
RFC3P40938 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC3P40938 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 DPPA2P4-201ENST00000563717 878 ntBASIC5.26□□□□□ -1.57
RFC3P40938 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC3P40938 AC007448.1-201ENST00000582714 234 ntBASIC5.26□□□□□ -1.57
RFC3P40938 MIR4260-201ENST00000583107 67 ntBASIC5.26□□□□□ -1.57
RFC3P40938 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RFC3P40938 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.26□□□□□ -1.57
RFC3P40938 AC132825.8-201ENST00000640783 297 ntBASIC5.26□□□□□ -1.57
RFC3P40938 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RFC3P40938 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC3P40938 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC3P40938 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms