Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC011411.1-201ENST00000509592 876 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM23P36406 AC078899.1-201ENST00000521432 1185 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM23P36406 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM23P36406 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM23P36406 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM23P36406 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM23P36406 FO393422.1-201ENST00000603908 708 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 MIR6768-201ENST00000610734 72 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 AL354950.1-201ENST00000614150 568 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 AC069234.4-201ENST00000621276 412 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 AL161756.3-201ENST00000641216 2071 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM23P36406 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM23P36406 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM23P36406 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM23P36406 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM23P36406 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM23P36406 MFSD8-239ENST00000641590 2479 ntBASIC5.69□□□□□ -1.5
TRIM23P36406 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM23P36406 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM23P36406 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM23P36406 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM23P36406 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TRIM23P36406 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 AC022164.1-201ENST00000568767 2673 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AP004607.3-201ENST00000530354 3915 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AL353796.1-201ENST00000561542 3241 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 RNA5SP131-201ENST00000365452 119 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AL391422.1-201ENST00000402155 436 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 AC013268.2-201ENST00000420753 337 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AC073909.1-201ENST00000447112 999 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM23P36406 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM23P36406 AL136038.1-201ENST00000497246 351 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM23P36406 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM23P36406 AC105384.2-201ENST00000508433 640 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 snoU109.5-201ENST00000516231 132 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM23P36406 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM23P36406 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM23P36406 AP001542.1-201ENST00000591314 200 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AC006272.2-201ENST00000594725 163 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 AC104695.2-201ENST00000605056 775 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM23P36406 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM23P36406 AC004477.3-201ENST00000614061 590 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AL691477.1-201ENST00000624398 162 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 AC007683.2-201ENST00000624681 714 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TRIM23P36406 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 MRE11P1-201ENST00000464884 2127 ntBASIC5.68□□□□□ -1.5
TRIM23P36406 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM23P36406 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM23P36406 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM23P36406 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM23P36406 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM23P36406 MAPK10-338ENST00000641647 3362 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM23P36406 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM23P36406 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM23P36406 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM23P36406 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM23P36406 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
TRIM23P36406 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM23P36406 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM23P36406 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM23P36406 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 NENFP1-201ENST00000419476 466 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 AC079355.1-201ENST00000421770 223 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 AC113412.1-201ENST00000425840 504 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM23P36406 OR7E116P-201ENST00000448529 957 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM23P36406 AC079080.1-201ENST00000479841 822 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 AC087672.1-201ENST00000479876 766 ntBASIC5.67□□□□□ -1.5
TRIM23P36406 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM23P36406 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms