Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
HOXC12P31275 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
HOXC12P31275 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 AL356473.1-201ENST00000406203 1408 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 GTF2H2B-203ENST00000508065 1432 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 KARSP2-201ENST00000415696 1639 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HOXC12P31275 RPL24P4-201ENST00000326586 421 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HOXC12P31275 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HOXC12P31275 OR5H15-201ENST00000383696 930 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 RNU6-1263P-201ENST00000384601 106 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 MIR191-201ENST00000384873 92 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 RNU1-56P-201ENST00000391303 164 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 RPL7P58-201ENST00000402913 758 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL049697.3-201ENST00000406493 982 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL390774.1-201ENST00000411924 246 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AF274854.1-201ENST00000413236 615 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC004022.2-201ENST00000413824 193 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 DPPA2P2-201ENST00000418220 897 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC012519.1-201ENST00000424588 610 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 FAM96AP1-201ENST00000430879 482 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 FTH1P20-201ENST00000434913 548 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 LINC00328-2P-201ENST00000436585 219 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL845321.1-201ENST00000444603 348 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC114928.1-201ENST00000446516 415 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 GAPDHP16-201ENST00000448152 962 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC005517.1-201ENST00000452091 489 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 AC037198.2-201ENST00000478845 733 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 NACAP6-201ENST00000509572 622 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC138517.1-201ENST00000515724 568 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC105185.1-201ENST00000518705 535 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 NPIPB14P-203ENST00000532298 987 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 OR4A6P-201ENST00000534364 970 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXC12P31275 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC107958.1-201ENST00000556576 290 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 AGGF1P4-201ENST00000568249 801 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXC12P31275 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXC12P31275 RSL24D1P11-201ENST00000591045 491 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC107304.1-201ENST00000604229 296 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC092960.1-201ENST00000604762 351 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC100767.2-201ENST00000604840 693 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXC12P31275 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 AP005137.2-201ENST00000609238 400 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AP005329.3-201ENST00000609924 686 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC097505.1-201ENST00000610199 565 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 U1.34-201ENST00000618578 162 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 AL049541.2-201ENST00000626377 555 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 AC090582.1-201ENST00000636321 199 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 CASC19-243ENST00000641588 1546 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 PROS2P-201ENST00000474651 1951 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXC12P31275 NSRP1P1-201ENST00000444067 1693 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms