Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC234771.4-201ENST00000441416 730 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 BMS1P10-201ENST00000443754 1120 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 TRIM60P16-201ENST00000444048 694 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 CYCSP24-201ENST00000445119 316 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 RPL31P11-202ENST00000454082 372 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 AL591473.1-201ENST00000464297 313 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 DUTP1-201ENST00000493631 470 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 SNX18P25-201ENST00000510539 758 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 SMIM12P1-201ENST00000603004 274 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC009237.13-201ENST00000603193 276 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC145423.1-201ENST00000605712 336 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC015871.5-202ENST00000623252 701 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC073869.10-201ENST00000642016 354 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 AC004817.4-201ENST00000602396 3625 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 AL034549.2-201ENST00000618285 3373 ntBASIC4.84□□□□□ -1.63
HLA-DMAP28067 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DMAP28067 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DMAP28067 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DMAP28067 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DMAP28067 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HLA-DMAP28067 DLD-205ENST00000440410 1993 ntTSL 2 BASIC4.84□□□□□ -1.64
HLA-DMAP28067 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.64
HLA-DMAP28067 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 RNA5SP326-201ENST00000363209 110 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AL078599.1-201ENST00000402075 293 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 RPL12P9-201ENST00000412942 488 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 TMEM183AP1-205ENST00000432739 290 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 RPL19P16-201ENST00000433839 588 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC128677.1-201ENST00000436016 442 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 OR7E116P-201ENST00000448529 957 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC002553.2-201ENST00000453217 340 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC023245.1-201ENST00000468501 517 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 BTG4P1-201ENST00000510421 183 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC091912.1-201ENST00000511351 248 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC138938.1-201ENST00000515431 782 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 BNIP3P1-201ENST00000547295 580 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC139697.1-201ENST00000548429 745 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC027796.1-201ENST00000575593 512 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 DHFRP1-201ENST00000579682 559 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC024267.2-201ENST00000582737 417 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AL365181.4-201ENST00000609800 547 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 AC073488.3-201ENST00000631611 778 ntBASIC4.83□□□□□ -1.64
HLA-DMAP28067 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMAP28067 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMAP28067 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 AL606537.1-201ENST00000607258 2011 ntBASIC4.82□□□□□ -1.64
HLA-DMAP28067 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DMAP28067 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMAP28067 SELENOWP1-201ENST00000322792 252 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms