Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6□□□□□ -1.45
PDGFRAP16234 MTATP6P1-201ENST00000514057 681 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6□□□□□ -1.45
PDGFRAP16234 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6□□□□□ -1.45
PDGFRAP16234 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6□□□□□ -1.45
PDGFRAP16234 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6□□□□□ -1.45
PDGFRAP16234 AC011270.1-201ENST00000558606 583 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AP001357.1-201ENST00000586304 1053 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC015802.2-201ENST00000589690 189 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC093388.1-201ENST00000609166 430 ntBASIC6□□□□□ -1.45
PDGFRAP16234 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6□□□□□ -1.45
PDGFRAP16234 AC107905.1-201ENST00000616204 426 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AL031658.2-201ENST00000616850 651 ntBASIC6□□□□□ -1.45
PDGFRAP16234 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6□□□□□ -1.45
PDGFRAP16234 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6□□□□□ -1.45
PDGFRAP16234 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6□□□□□ -1.45
PDGFRAP16234 AC097063.1-201ENST00000426714 1797 ntBASIC6□□□□□ -1.45
PDGFRAP16234 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
PDGFRAP16234 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6□□□□□ -1.45
PDGFRAP16234 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
PDGFRAP16234 AC068870.3-201ENST00000625077 2536 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFRAP16234 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDGFRAP16234 AC138907.8-201ENST00000623981 2256 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PDGFRAP16234 CR382285.2-201ENST00000624662 1495 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 RNU1-136P-201ENST00000384181 164 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 MIR130A-201ENST00000385274 89 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 RPS3AP2-201ENST00000407190 754 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFRAP16234 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFRAP16234 RPL12P43-201ENST00000420608 499 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 BX119321.1-201ENST00000428912 797 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 RPL36AP39-201ENST00000445859 318 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFRAP16234 AC091544.1-201ENST00000484702 348 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 RPL7P51-201ENST00000490532 749 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 IGLVIV-64-201ENST00000518581 301 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 IGKV3D-34-201ENST00000522638 302 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFRAP16234 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFRAP16234 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFRAP16234 HNRNPCP1-201ENST00000556181 766 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFRAP16234 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFRAP16234 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFRAP16234 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFRAP16234 AC090607.5-201ENST00000615692 224 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 AC127024.6-201ENST00000621598 424 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 AC103703.1-201ENST00000634783 663 ntBASIC5.99□□□□□ -1.45
PDGFRAP16234 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PDGFRAP16234 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFRAP16234 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
PDGFRAP16234 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PDGFRAP16234 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PDGFRAP16234 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDGFRAP16234 BCORP1-203ENST00000513194 5093 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 AL034546.1-201ENST00000623740 3693 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PDGFRAP16234 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFRAP16234 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFRAP16234 MIR375-201ENST00000362103 64 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 RN7SKP292-201ENST00000365522 317 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 RN7SKP269-201ENST00000365545 319 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PDGFRAP16234 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDGFRAP16234 AC240504.1-201ENST00000395709 845 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFRAP16234 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFRAP16234 PRUNEP1-201ENST00000425846 705 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 NAP1L4P2-201ENST00000425958 899 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFRAP16234 HMGB3P24-201ENST00000433260 622 ntBASIC5.98□□□□□ -1.45
PDGFRAP16234 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms