Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CFTRP13569 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFTRP13569 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CFTRP13569 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.22□□□□□ -0.93
CFTRP13569 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC9.22□□□□□ -0.93
CFTRP13569 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC9.22□□□□□ -0.93
CFTRP13569 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC9.22□□□□□ -0.93
CFTRP13569 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC9.22□□□□□ -0.93
CFTRP13569 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC9.22□□□□□ -0.93
CFTRP13569 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CFTRP13569 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC9.22□□□□□ -0.93
CFTRP13569 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFTRP13569 AC007114.2-201ENST00000576014 4281 ntBASIC9.22□□□□□ -0.93
CFTRP13569 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.22□□□□□ -0.93
CFTRP13569 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC9.22□□□□□ -0.93
CFTRP13569 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CFTRP13569 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC9.21□□□□□ -0.93
CFTRP13569 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC9.21□□□□□ -0.93
CFTRP13569 AC009963.2-201ENST00000453431 138 ntBASIC9.21□□□□□ -0.93
CFTRP13569 AL356981.1-201ENST00000454879 684 ntBASIC9.21□□□□□ -0.93
CFTRP13569 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
CFTRP13569 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC9.21□□□□□ -0.93
CFTRP13569 AC021106.1-201ENST00000509020 1058 ntBASIC9.21□□□□□ -0.93
CFTRP13569 IGKV1-32-201ENST00000519290 311 ntBASIC9.21□□□□□ -0.93
CFTRP13569 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC9.21□□□□□ -0.93
CFTRP13569 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC9.21□□□□□ -0.93
CFTRP13569 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC9.21□□□□□ -0.93
CFTRP13569 OR11H3P-201ENST00000554547 982 ntBASIC9.21□□□□□ -0.93
CFTRP13569 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CFTRP13569 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC9.21□□□□□ -0.93
CFTRP13569 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC9.21□□□□□ -0.93
CFTRP13569 AC135068.5-201ENST00000624197 983 ntBASIC9.21□□□□□ -0.93
CFTRP13569 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC9.21□□□□□ -0.93
CFTRP13569 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
CFTRP13569 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.21□□□□□ -0.93
CFTRP13569 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC9.21□□□□□ -0.93
CFTRP13569 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CFTRP13569 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.21□□□□□ -0.93
CFTRP13569 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CFTRP13569 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.93
CFTRP13569 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CFTRP13569 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CFTRP13569 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
CFTRP13569 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CFTRP13569 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.21□□□□□ -0.94
CFTRP13569 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
CFTRP13569 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.21□□□□□ -0.94
CFTRP13569 SNORD1C-201ENST00000363315 78 ntBASIC9.21□□□□□ -0.94
CFTRP13569 CHEK2P3-201ENST00000416118 248 ntBASIC9.21□□□□□ -0.94
CFTRP13569 COX6CP17-201ENST00000421389 185 ntBASIC9.21□□□□□ -0.94
CFTRP13569 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.21□□□□□ -0.94
CFTRP13569 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC9.21□□□□□ -0.94
CFTRP13569 CYCSP42-201ENST00000450823 238 ntBASIC9.21□□□□□ -0.94
CFTRP13569 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CFTRP13569 AC109464.1-201ENST00000511091 819 ntBASIC9.21□□□□□ -0.94
CFTRP13569 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC9.21□□□□□ -0.94
CFTRP13569 AC136624.4-201ENST00000573044 370 ntBASIC9.21□□□□□ -0.94
CFTRP13569 CYCSP1-201ENST00000604815 315 ntBASIC9.21□□□□□ -0.94
CFTRP13569 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC9.21□□□□□ -0.94
CFTRP13569 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CFTRP13569 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
CFTRP13569 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC9.2□□□□□ -0.94
CFTRP13569 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.2□□□□□ -0.94
CFTRP13569 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 WBP11P1-201ENST00000562560 1931 ntBASIC9.2□□□□□ -0.94
CFTRP13569 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
CFTRP13569 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CFTRP13569 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 RPL12P39-201ENST00000455456 496 ntBASIC9.2□□□□□ -0.94
CFTRP13569 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC9.2□□□□□ -0.94
CFTRP13569 PDCD6IPP2-207ENST00000566321 1069 ntBASIC9.2□□□□□ -0.94
CFTRP13569 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 AP001885.1-201ENST00000621658 558 ntBASIC9.2□□□□□ -0.94
CFTRP13569 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFTRP13569 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.19□□□□□ -0.94
CFTRP13569 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CFTRP13569 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CFTRP13569 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CFTRP13569 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC9.19□□□□□ -0.94
CFTRP13569 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
CFTRP13569 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
CFTRP13569 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CFTRP13569 AC119751.6-201ENST00000416712 186 ntBASIC9.19□□□□□ -0.94
CFTRP13569 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC9.19□□□□□ -0.94
CFTRP13569 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC9.19□□□□□ -0.94
CFTRP13569 snoU109.5-201ENST00000516231 132 ntBASIC9.19□□□□□ -0.94
CFTRP13569 AP006289.1-201ENST00000538089 277 ntBASIC9.19□□□□□ -0.94
CFTRP13569 BGLT3-201ENST00000564523 994 ntBASIC9.19□□□□□ -0.94
CFTRP13569 AP005131.7-201ENST00000610087 611 ntBASIC9.19□□□□□ -0.94
CFTRP13569 ALB-219ENST00000621085 1418 ntTSL 5 BASIC9.19□□□□□ -0.94
CFTRP13569 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CFTRP13569 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms