Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 DNM1P47-203ENST00000571780 12667 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC6P09630 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC6P09630 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HOXC6P09630 U3.2-201ENST00000362981 210 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
HOXC6P09630 Y_RNA.625-201ENST00000411256 107 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC6P09630 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC6P09630 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 AURKAPS1-201ENST00000451805 1212 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 RPS23P2-201ENST00000463671 415 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXC6P09630 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC6P09630 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXC6P09630 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXC6P09630 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC6P09630 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 AC005014.3-201ENST00000605985 190 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 MIR6748-201ENST00000610433 71 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 AC126915.2-201ENST00000610957 190 ntBASIC6.4□□□□□ -1.38
HOXC6P09630 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC6P09630 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC6P09630 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.4□□□□□ -1.39
HOXC6P09630 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.4□□□□□ -1.39
HOXC6P09630 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC6P09630 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.4□□□□□ -1.39
HOXC6P09630 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC6P09630 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC6P09630 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HOXC6P09630 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC6P09630 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
HOXC6P09630 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC6P09630 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC6P09630 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXC6P09630 RNA5SP339-201ENST00000390987 122 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 AC117434.1-201ENST00000419971 836 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC6P09630 AL133325.1-201ENST00000421090 382 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 MTND2P11-201ENST00000423638 648 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 AL590762.4-201ENST00000425885 253 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC6P09630 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC6P09630 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC6P09630 H2AFZP6-201ENST00000444403 394 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC6P09630 AC079080.1-201ENST00000479841 822 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 RN7SL447P-201ENST00000494711 245 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC6P09630 SNORA26.10-201ENST00000516427 141 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC6P09630 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.39□□□□□ -1.39
HOXC6P09630 AC087763.1-201ENST00000603391 286 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 AL391262.2-201ENST00000622466 494 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HOXC6P09630 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HOXC6P09630 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
HOXC6P09630 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 ZNF733P-202ENST00000444809 1573 ntBASIC6.39□□□□□ -1.39
HOXC6P09630 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC6P09630 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC6P09630 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC6P09630 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXC6P09630 AC107980.1-201ENST00000558671 3355 ntBASIC6.38□□□□□ -1.39
HOXC6P09630 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.38□□□□□ -1.39
HOXC6P09630 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HOXC6P09630 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC6P09630 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC6P09630 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC6P09630 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC6P09630 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC6P09630 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.38□□□□□ -1.39
HOXC6P09630 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC6P09630 RNF10P1-201ENST00000418589 369 ntBASIC6.38□□□□□ -1.39
HOXC6P09630 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC6P09630 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC6P09630 PSMD10P3-201ENST00000437000 448 ntBASIC6.38□□□□□ -1.39
HOXC6P09630 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms