Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 YWHAZP6-201ENST00000399764 738 ntBASIC6.13□□□□□ -1.43
TPM1P09493 RANP7-201ENST00000418085 644 ntBASIC6.13□□□□□ -1.43
TPM1P09493 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 AL356121.1-201ENST00000442911 156 ntBASIC6.13□□□□□ -1.43
TPM1P09493 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM1P09493 AL122020.1-201ENST00000472287 459 ntBASIC6.13□□□□□ -1.43
TPM1P09493 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.13□□□□□ -1.43
TPM1P09493 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 RN7SKP253-201ENST00000516424 309 ntBASIC6.13□□□□□ -1.43
TPM1P09493 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.13□□□□□ -1.43
TPM1P09493 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.13□□□□□ -1.43
TPM1P09493 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.13□□□□□ -1.43
TPM1P09493 AC002519.2-203ENST00000567043 837 ntBASIC6.13□□□□□ -1.43
TPM1P09493 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 AC024884.1-201ENST00000620583 399 ntBASIC6.13□□□□□ -1.43
TPM1P09493 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM1P09493 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.13□□□□□ -1.43
TPM1P09493 SAMMSON-227ENST00000642114 1199 ntBASIC6.13□□□□□ -1.43
TPM1P09493 AC093225.1-201ENST00000506867 1408 ntBASIC6.13□□□□□ -1.43
TPM1P09493 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 AL359715.3-201ENST00000569267 2123 ntBASIC6.13□□□□□ -1.43
TPM1P09493 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM1P09493 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM1P09493 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 RN7SKP257-201ENST00000364525 309 ntBASIC6.12□□□□□ -1.43
TPM1P09493 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TPM1P09493 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.12□□□□□ -1.43
TPM1P09493 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.12□□□□□ -1.43
TPM1P09493 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.12□□□□□ -1.43
TPM1P09493 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 AC007679.3-201ENST00000434035 414 ntBASIC6.12□□□□□ -1.43
TPM1P09493 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.12□□□□□ -1.43
TPM1P09493 RPL5P7-201ENST00000444235 813 ntBASIC6.12□□□□□ -1.43
TPM1P09493 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 AC012512.1-201ENST00000446594 718 ntBASIC6.12□□□□□ -1.43
TPM1P09493 CFL1P4-201ENST00000451536 498 ntBASIC6.12□□□□□ -1.43
TPM1P09493 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.12□□□□□ -1.43
TPM1P09493 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 AL158068.1-201ENST00000506116 616 ntBASIC6.12□□□□□ -1.43
TPM1P09493 SCARNA18.1-201ENST00000516330 83 ntBASIC6.12□□□□□ -1.43
TPM1P09493 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM1P09493 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.12□□□□□ -1.43
TPM1P09493 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM1P09493 MIR4311-201ENST00000580794 100 ntBASIC6.12□□□□□ -1.43
TPM1P09493 FAM27E4-201ENST00000605259 342 ntBASIC6.12□□□□□ -1.43
TPM1P09493 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM1P09493 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TPM1P09493 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM1P09493 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM1P09493 PWAR1-201ENST00000624188 2414 ntBASIC6.11□□□□□ -1.43
TPM1P09493 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM1P09493 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 RNA5SP241-201ENST00000391326 114 ntBASIC6.11□□□□□ -1.43
TPM1P09493 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 CTSL3P-202ENST00000412179 788 ntBASIC6.11□□□□□ -1.43
TPM1P09493 RPS6P23-201ENST00000413224 722 ntBASIC6.11□□□□□ -1.43
TPM1P09493 HSPE1P16-201ENST00000426640 348 ntBASIC6.11□□□□□ -1.43
TPM1P09493 RPSAP32-201ENST00000432681 526 ntBASIC6.11□□□□□ -1.43
TPM1P09493 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM1P09493 RBMY2AP-201ENST00000445405 1157 ntBASIC6.11□□□□□ -1.43
TPM1P09493 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM1P09493 RBMY2CP-201ENST00000448575 1157 ntBASIC6.11□□□□□ -1.43
TPM1P09493 RBMY2DP-202ENST00000448881 1157 ntBASIC6.11□□□□□ -1.43
TPM1P09493 RBMY2BP-202ENST00000451071 1156 ntBASIC6.11□□□□□ -1.43
TPM1P09493 TAAR4P-201ENST00000454843 1039 ntBASIC6.11□□□□□ -1.43
TPM1P09493 AP000797.2-201ENST00000475768 606 ntBASIC6.11□□□□□ -1.43
TPM1P09493 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.11□□□□□ -1.43
TPM1P09493 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.11□□□□□ -1.43
TPM1P09493 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.11□□□□□ -1.43
TPM1P09493 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.11□□□□□ -1.43
TPM1P09493 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms