Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.29□□□□□ -1.4
MMP3P08254 AC245128.3-201ENST00000594721 748 ntBASIC6.29□□□□□ -1.4
MMP3P08254 MIR6798-201ENST00000612887 67 ntBASIC6.29□□□□□ -1.4
MMP3P08254 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.29□□□□□ -1.4
MMP3P08254 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MMP3P08254 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
MMP3P08254 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.29□□□□□ -1.4
MMP3P08254 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 WBP11P1-201ENST00000562560 1931 ntBASIC6.29□□□□□ -1.4
MMP3P08254 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.28□□□□□ -1.4
MMP3P08254 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
MMP3P08254 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
MMP3P08254 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.28□□□□□ -1.4
MMP3P08254 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
MMP3P08254 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
MMP3P08254 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 RNU4-23P-201ENST00000362839 140 ntBASIC6.28□□□□□ -1.4
MMP3P08254 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.28□□□□□ -1.4
MMP3P08254 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
MMP3P08254 MIR223-201ENST00000385204 110 ntBASIC6.28□□□□□ -1.4
MMP3P08254 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
MMP3P08254 DHFRP5-201ENST00000406944 564 ntBASIC6.28□□□□□ -1.4
MMP3P08254 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.28□□□□□ -1.4
MMP3P08254 SLC35E1P1-201ENST00000419313 864 ntBASIC6.28□□□□□ -1.4
MMP3P08254 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.28□□□□□ -1.4
MMP3P08254 GAPDHP58-201ENST00000438477 1006 ntBASIC6.28□□□□□ -1.4
MMP3P08254 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.28□□□□□ -1.4
MMP3P08254 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.28□□□□□ -1.4
MMP3P08254 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.28□□□□□ -1.4
MMP3P08254 AC093270.2-201ENST00000486157 792 ntBASIC6.28□□□□□ -1.4
MMP3P08254 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 PGAM1P13-201ENST00000507497 754 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
MMP3P08254 AC078899.1-201ENST00000521432 1185 ntBASIC6.28□□□□□ -1.4
MMP3P08254 OR10G5P-201ENST00000532733 358 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.28□□□□□ -1.4
MMP3P08254 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.28□□□□□ -1.4
MMP3P08254 AL049779.2-201ENST00000553847 315 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.28□□□□□ -1.4
MMP3P08254 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.28□□□□□ -1.4
MMP3P08254 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.28□□□□□ -1.4
MMP3P08254 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.28□□□□□ -1.4
MMP3P08254 RPL21P136-201ENST00000605378 396 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AC000068.2-201ENST00000608816 460 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AP005131.7-201ENST00000610087 611 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AL136295.6-201ENST00000610486 658 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AC025574.2-201ENST00000615621 514 ntBASIC6.28□□□□□ -1.4
MMP3P08254 MTCO1P1-201ENST00000624263 1081 ntBASIC6.28□□□□□ -1.4
MMP3P08254 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.28□□□□□ -1.4
MMP3P08254 HPVC1-201ENST00000629899 1198 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.28□□□□□ -1.4
MMP3P08254 SAMMSON-209ENST00000641222 1100 ntBASIC6.28□□□□□ -1.4
MMP3P08254 AL034546.1-201ENST00000623740 3693 ntBASIC6.28□□□□□ -1.4
MMP3P08254 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.28□□□□□ -1.4
MMP3P08254 PWAR1-201ENST00000624188 2414 ntBASIC6.28□□□□□ -1.4
MMP3P08254 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
MMP3P08254 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.28□□□□□ -1.4
MMP3P08254 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MMP3P08254 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.27□□□□□ -1.4
MMP3P08254 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.27□□□□□ -1.41
MMP3P08254 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.27□□□□□ -1.41
MMP3P08254 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 TRGV7-201ENST00000427089 353 ntBASIC6.27□□□□□ -1.41
MMP3P08254 MTATP6P11-201ENST00000428071 670 ntBASIC6.27□□□□□ -1.41
MMP3P08254 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.27□□□□□ -1.41
MMP3P08254 AL365220.1-201ENST00000432923 399 ntBASIC6.27□□□□□ -1.41
MMP3P08254 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.27□□□□□ -1.41
MMP3P08254 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.27□□□□□ -1.41
MMP3P08254 EEF1B2P5-201ENST00000444820 548 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms