Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL049737.1-201ENST00000413920 1403 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 MTND4P3-201ENST00000417829 541 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 ELOCP9-201ENST00000418624 239 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 NAP1L4P2-201ENST00000425958 899 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC098826.1-201ENST00000433943 471 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.12□□□□□ -1.43
CNOT4O95628 RPL6P30-201ENST00000443382 862 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 CUBNP2-201ENST00000443534 1139 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 OTX2P1-201ENST00000450956 354 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 AL133477.1-201ENST00000457472 514 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 NMNAT1P3-201ENST00000457517 888 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 MTND5P29-201ENST00000458676 1807 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC004890.1-201ENST00000461005 181 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 RPS4XP6-201ENST00000477670 797 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 PPP1R2P6-201ENST00000478565 588 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 RPS14P8-201ENST00000478778 369 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 ZNF90P1-201ENST00000480493 1951 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC004815.1-201ENST00000484185 331 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 ECM1P2-201ENST00000503354 1577 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 IGHV3-63-201ENST00000518422 341 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.12□□□□□ -1.43
CNOT4O95628 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC023813.2-201ENST00000564321 469 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 MTND4LP24-201ENST00000572277 291 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 MIR4428-201ENST00000584884 73 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.12□□□□□ -1.43
CNOT4O95628 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC036176.3-201ENST00000602456 418 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC024589.2-201ENST00000605642 1294 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AL021997.1-201ENST00000605757 193 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC013468.1-201ENST00000608680 598 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC116165.2-201ENST00000616705 206 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC010975.3-201ENST00000618727 978 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 AC211486.4-201ENST00000621495 113 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 Z69908.1-201ENST00000622603 247 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AL157770.1-201ENST00000623049 439 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC007490.1-201ENST00000624321 703 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AL603839.4-201ENST00000624658 1005 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 CLUHP10-201ENST00000631979 980 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC011471.4-201ENST00000638271 216 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CNOT4O95628 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 AC079949.2-201ENST00000617117 2933 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.11□□□□□ -1.43
CNOT4O95628 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.11□□□□□ -1.43
CNOT4O95628 SNX18P3-202ENST00000565670 1750 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CNOT4O95628 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CNOT4O95628 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.11□□□□□ -1.43
CNOT4O95628 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.11□□□□□ -1.43
CNOT4O95628 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.11□□□□□ -1.43
CNOT4O95628 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.11□□□□□ -1.43
CNOT4O95628 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CNOT4O95628 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNOT4O95628 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNOT4O95628 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CNOT4O95628 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.11□□□□□ -1.43
CNOT4O95628 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNOT4O95628 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CNOT4O95628 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.11□□□□□ -1.43
CNOT4O95628 FUNDC2P3-201ENST00000334716 533 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 RNU4-75P-201ENST00000364621 146 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 Y_RNA.472-201ENST00000384322 102 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 MIR199B-201ENST00000384849 110 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 MT-TP-201ENST00000387461 68 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 RN7SKP91-201ENST00000410852 288 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 AC004022.2-201ENST00000413824 193 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 AL590806.1-201ENST00000415818 853 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 MTCYBP5-201ENST00000423752 1135 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 AP003385.1-201ENST00000426387 893 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.11□□□□□ -1.43
CNOT4O95628 RPL23AP4-201ENST00000427757 463 ntBASIC6.11□□□□□ -1.43
CNOT4O95628 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms