Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN2BO60939 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN2BO60939 PWAR1-201ENST00000624188 2414 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 RNA5SP187-201ENST00000384400 119 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 MIR1203-201ENST00000408812 85 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 AL133482.1-201ENST00000415988 498 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 AC009784.1-201ENST00000426484 460 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 BX323845.3-201ENST00000428215 527 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 AC126120.1-201ENST00000431082 470 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN2BO60939 RPL5P25-201ENST00000441148 775 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC021106.1-201ENST00000509020 1058 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SCN2BO60939 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN2BO60939 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC010632.3-201ENST00000611377 369 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 AL162574.1-201ENST00000615702 950 ntBASIC5.32□□□□□ -1.56
SCN2BO60939 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SCN2BO60939 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN2BO60939 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN2BO60939 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SCN2BO60939 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN2BO60939 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 CDC27P2-201ENST00000425026 1922 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SCN2BO60939 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 SNORA64.1-201ENST00000362600 132 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 RN7SKP187-201ENST00000365536 330 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 GPS2P1-201ENST00000411761 986 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN2BO60939 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
SCN2BO60939 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 AC110602.1-201ENST00000437414 318 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AL359265.1-201ENST00000440296 795 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 SEPT7P3-201ENST00000455017 621 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 CTSLP6-201ENST00000458273 1002 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 NXT1P1-201ENST00000458481 316 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 RPS3AP15-201ENST00000483874 781 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.31□□□□□ -1.56
SCN2BO60939 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN2BO60939 OR5H7P-201ENST00000514084 930 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AC079064.1-201ENST00000528365 362 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN2BO60939 AP004609.2-201ENST00000532177 190 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN2BO60939 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.31□□□□□ -1.56
SCN2BO60939 MIR4311-201ENST00000580794 100 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.31□□□□□ -1.56
SCN2BO60939 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 AC090607.5-201ENST00000615692 224 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 AC073593.1-201ENST00000624500 411 ntBASIC5.31□□□□□ -1.56
SCN2BO60939 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SCN2BO60939 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN2BO60939 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SCN2BO60939 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN2BO60939 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN2BO60939 AL359715.3-201ENST00000569267 2123 ntBASIC5.3□□□□□ -1.56
SCN2BO60939 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms