Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX4O60224 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SSX4O60224 AC079776.5-201ENST00000641920 211 ntBASIC5.38□□□□□ -1.55
SSX4O60224 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.38□□□□□ -1.55
SSX4O60224 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 AL022311.1-201ENST00000623726 19416 ntBASIC5.38□□□□□ -1.55
SSX4O60224 PROS2P-201ENST00000474651 1951 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AL356317.1-201ENST00000396110 1436 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AP001029.2-203ENST00000589795 4910 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 AC024341.1-201ENST00000526444 1552 ntBASIC5.38□□□□□ -1.55
SSX4O60224 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX4O60224 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 AC125336.1-201ENST00000508893 2827 ntBASIC5.37□□□□□ -1.55
SSX4O60224 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 AC023490.2-201ENST00000359859 470 ntBASIC5.37□□□□□ -1.55
SSX4O60224 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 RN7SKP108-201ENST00000411367 328 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX4O60224 RPS3P2-201ENST00000421346 701 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX4O60224 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX4O60224 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX4O60224 MTND5P8-201ENST00000449817 1083 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.37□□□□□ -1.55
SSX4O60224 MTND6P32-201ENST00000457611 483 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AC073594.1-201ENST00000462065 364 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AL049829.1-201ENST00000465411 156 ntBASIC5.37□□□□□ -1.55
SSX4O60224 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX4O60224 TRBV5-2-201ENST00000489095 273 ntBASIC5.37□□□□□ -1.55
SSX4O60224 OR7E99P-201ENST00000505750 922 ntBASIC5.37□□□□□ -1.55
SSX4O60224 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.37□□□□□ -1.55
SSX4O60224 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 AP001804.2-201ENST00000533932 910 ntBASIC5.37□□□□□ -1.55
SSX4O60224 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX4O60224 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 AC125612.1-201ENST00000547580 377 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX4O60224 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX4O60224 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX4O60224 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 AC008521.2-201ENST00000591021 259 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.37□□□□□ -1.55
SSX4O60224 AC092266.1-201ENST00000610958 165 ntBASIC5.37□□□□□ -1.55
SSX4O60224 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX4O60224 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX4O60224 AC011933.2-201ENST00000578539 2790 ntBASIC5.37□□□□□ -1.55
SSX4O60224 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX4O60224 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSX4O60224 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX4O60224 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SSX4O60224 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 SNORA51.9-201ENST00000384295 124 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AC005522.1-201ENST00000395416 346 ntBASIC5.36□□□□□ -1.55
SSX4O60224 CCNB2P1-201ENST00000399411 1150 ntBASIC5.36□□□□□ -1.55
SSX4O60224 SOCS5P1-201ENST00000440415 949 ntBASIC5.36□□□□□ -1.55
SSX4O60224 SNRPFP2-201ENST00000440710 251 ntBASIC5.36□□□□□ -1.55
SSX4O60224 Z99127.2-201ENST00000441426 334 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX4O60224 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX4O60224 BUD31P2-201ENST00000449374 300 ntBASIC5.36□□□□□ -1.55
SSX4O60224 PPIAP27-201ENST00000453800 265 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AL133351.3-201ENST00000454998 193 ntBASIC5.36□□□□□ -1.55
SSX4O60224 SETP20-201ENST00000457046 852 ntBASIC5.36□□□□□ -1.55
SSX4O60224 RPL12P31-201ENST00000478433 450 ntBASIC5.36□□□□□ -1.55
SSX4O60224 RWDD4P1-201ENST00000488019 565 ntBASIC5.36□□□□□ -1.55
SSX4O60224 LSM3P4-201ENST00000502948 309 ntBASIC5.36□□□□□ -1.55
SSX4O60224 OR4D12P-201ENST00000509361 911 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms