Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIR4311-201ENST00000580794 100 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 H3F3BP2-201ENST00000583907 357 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC090953.1-201ENST00000604305 1092 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC188H7C350 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC026367.3-201ENST00000619032 590 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 AC005899.6-201ENST00000620729 297 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC188H7C350 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC188H7C350 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC188H7C350 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CCDC188H7C350 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 SNORA48.4-201ENST00000391089 134 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC188H7C350 SETP9-201ENST00000423837 832 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC188H7C350 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CCDC188H7C350 RN7SL362P-201ENST00000494228 267 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC188H7C350 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC188H7C350 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC188H7C350 RPA2P1-201ENST00000556557 721 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC188H7C350 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 RN7SL290P-201ENST00000578661 300 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 ARGFXP2-201ENST00000579304 949 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 MIR4776-2-201ENST00000580204 80 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 RN7SL66P-201ENST00000582099 264 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 NPM1P45-201ENST00000583151 559 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 AC090236.2-201ENST00000587933 1101 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC188H7C350 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC188H7C350 AC008833.1-201ENST00000611633 691 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC188H7C350 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC188H7C350 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC188H7C350 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC188H7C350 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
CCDC188H7C350 HSPD1P9-201ENST00000420325 1636 ntBASIC5.84□□□□□ -1.47
CCDC188H7C350 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CCDC188H7C350 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC188H7C350 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AC005261.6-201ENST00000623072 1387 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC188H7C350 RNA5SP431-201ENST00000410312 120 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AC117434.1-201ENST00000419971 836 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 RPL7AP49-201ENST00000429522 581 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AL591438.1-201ENST00000433508 581 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 MAPRE1P3-201ENST00000435438 796 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC188H7C350 LINC00328-2P-201ENST00000436585 219 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AC092106.1-201ENST00000444291 373 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 RAD1P2-201ENST00000446414 663 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 OR52E3P-201ENST00000452083 936 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC188H7C350 RN7SL57P-201ENST00000493687 290 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 EIF3LP3-201ENST00000495197 822 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 IGLV3-24-201ENST00000517477 197 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC188H7C350 BCAS2P1-201ENST00000528022 632 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 WBP1LP11-201ENST00000586141 328 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AC004801.6-201ENST00000616571 978 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms