Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 CASC19-238ENST00000641523 1558 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 LIAS-201ENST00000261434 1258 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 SNORD74.4-201ENST00000364129 80 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AMELY-202ENST00000383036 621 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RNU1-74P-201ENST00000384108 171 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 PDCL3P5-201ENST00000398028 722 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 HMGB3P7-201ENST00000400214 611 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RPL7P57-201ENST00000423238 740 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 SNRPEP5-201ENST00000425442 278 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RPS6P12-201ENST00000432491 726 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RBMY2TP-201ENST00000451162 947 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AL591438.2-201ENST00000452635 691 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 CTSLP6-201ENST00000458273 1002 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SL390P-201ENST00000470634 284 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SL239P-201ENST00000490061 300 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC117482.1-201ENST00000490933 911 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 DUTP1-201ENST00000493631 470 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC114300.1-201ENST00000502347 280 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 ENPP7P3-201ENST00000509123 241 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 SCARNA11.1-201ENST00000516918 132 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SKP99-201ENST00000517028 307 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 IGLV3-7-201ENST00000522952 271 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 PGAM1P8-201ENST00000526979 453 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 OR7E161P-201ENST00000533722 967 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AGGF1P7-201ENST00000562369 913 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC122134.1-201ENST00000565664 1104 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 CYCSP40-201ENST00000575927 294 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SL138P-201ENST00000577405 287 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC138761.2-201ENST00000583878 343 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 MIR4786-201ENST00000583954 80 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC008622.1-201ENST00000597106 284 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC121493.1-201ENST00000602316 450 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AL591167.1-201ENST00000607321 456 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AL354872.2-201ENST00000607679 466 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC004466.3-201ENST00000615576 546 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC004825.2-201ENST00000616634 455 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 MFSD8-234ENST00000641503 1082 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 EOGT-210ENST00000615922 1931 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 CASC19-206ENST00000641028 1430 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 IQCB2P-201ENST00000401788 1633 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC093311.1-201ENST00000506586 2021 ntBASIC2.75□□□□□ -1.97
LINC01558Q9Y6Z2 AC027290.2-201ENST00000623210 18662 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL031985.3-201ENST00000565390 2449 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms