Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 RPL11P4-201ENST00000332269 436 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AL121886.1-201ENST00000358609 435 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 RNU1-134P-201ENST00000362935 165 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 RNA5SP85-201ENST00000365378 119 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 FTH1P26-201ENST00000406512 701 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC096644.3-201ENST00000416788 338 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 SETP10-201ENST00000424368 814 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC130360.1-201ENST00000425489 1117 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 DEFA9P-201ENST00000433042 285 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 FTLP8-201ENST00000446770 267 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AL445991.1-201ENST00000450381 475 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AL034369.1-201ENST00000453808 477 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AL354872.1-201ENST00000456361 967 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 MTCYBP14-201ENST00000457471 715 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 NXT1P1-201ENST00000458481 316 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 RPS23P2-201ENST00000463671 415 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 ATP5LP5-201ENST00000483050 299 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC130365.2-201ENST00000525882 1201 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 NPIPB14P-203ENST00000532298 987 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC025283.1-201ENST00000572039 734 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AL390877.1-201ENST00000605704 214 ntBASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KCNIP3Q9Y2W7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 UBTFL2-201ENST00000411859 1191 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC234781.4-201ENST00000419384 244 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC006509.1-201ENST00000420788 634 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 UBE2V2P1-201ENST00000434717 398 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 PCBP2P1-201ENST00000437262 977 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 RPS12P17-201ENST00000438591 377 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC239798.3-201ENST00000454459 408 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC092865.4-201ENST00000477936 615 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AL133372.1-201ENST00000493565 745 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AP000926.3-201ENST00000497201 299 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 RPS17P5-201ENST00000498293 408 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 SNORD116-30-201ENST00000516468 85 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 PSMC1P8-201ENST00000536820 1296 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 NMNAT1P5-201ENST00000559657 841 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms