Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL359715.3-201ENST00000569267 2123 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC073429.2-201ENST00000569694 1444 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
USP35Q9P2H5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
USP35Q9P2H5 SNORA74A-201ENST00000364089 198 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 RPL26P37-201ENST00000411983 438 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC007568.1-201ENST00000422912 471 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 HMGB3P10-201ENST00000434734 572 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 OR3D1P-201ENST00000438288 955 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 ELOCP3-201ENST00000439303 348 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 RN7SL610P-201ENST00000463845 291 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC078857.1-201ENST00000469870 667 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC108729.2-201ENST00000476543 840 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 RPL32P9-201ENST00000487963 407 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 SUMO1P1-201ENST00000497904 306 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 SCARNA18.1-201ENST00000516330 83 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 Y_RNA.710-201ENST00000516975 110 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 VTA1P2-201ENST00000520205 911 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC027026.1-201ENST00000532323 742 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 HMGN2P47-201ENST00000559378 272 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL137246.2-201ENST00000613439 662 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL391262.2-201ENST00000622466 494 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
USP35Q9P2H5 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
USP35Q9P2H5 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.32□□□□□ -1.08
USP35Q9P2H5 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
USP35Q9P2H5 AL033543.1-201ENST00000623440 13454 ntBASIC8.32□□□□□ -1.08
USP35Q9P2H5 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 HSPD1P7-201ENST00000447985 1686 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 MIR105-2-201ENST00000385083 81 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 AL391422.1-201ENST00000402155 436 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 AL096711.1-201ENST00000404780 554 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 AL353692.2-201ENST00000407054 335 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 PTGES3P2-201ENST00000407942 482 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 DEFA9P-201ENST00000433042 285 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 AC233702.7-202ENST00000582941 211 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 AL589674.2-201ENST00000604304 337 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 MIR6809-201ENST00000612189 116 ntBASIC8.31□□□□□ -1.08
USP35Q9P2H5 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
USP35Q9P2H5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
USP35Q9P2H5 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms