Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC097461.1-201ENST00000568928 2821 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 MAPK10-344ENST00000641718 3746 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 RPL22P22-201ENST00000395439 379 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 OR5W1P-201ENST00000423705 938 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 HSFY1P1-201ENST00000423928 1178 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC110602.1-201ENST00000437414 318 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC094085.1-201ENST00000468914 584 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 RN7SL326P-201ENST00000477493 296 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 MRPS21P8-201ENST00000569196 235 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 SS18L2P2-201ENST00000583960 235 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 GLYATL1P2-202ENST00000588046 902 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AL683813.2-201ENST00000605245 502 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 AP000864.1-201ENST00000609424 650 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC007275.1-201ENST00000621243 671 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC010435.1-201ENST00000623353 1177 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 AP003476.1-201ENST00000623984 516 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 CASC19-284ENST00000642142 1868 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC027575.3-201ENST00000583058 2747 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRFN1Q9P244 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.81□□□□□ -1.48
LRFN1Q9P244 AC011455.2-201ENST00000599320 3336 ntBASIC5.81□□□□□ -1.48
LRFN1Q9P244 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 FBXL21-201ENST00000297158 1305 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 SAMMSON-210ENST00000641260 1308 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 HSPD1P11-201ENST00000508643 1702 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 SNORD56.4-201ENST00000363883 71 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 RNU6-481P-201ENST00000384194 107 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 MIR320B1-201ENST00000390209 79 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 HMGB3P19-201ENST00000403971 560 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 LINC01347-201ENST00000417964 355 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 VN1R37P-201ENST00000419096 748 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 DPY19L1P2-201ENST00000426647 915 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC013262.1-201ENST00000426710 252 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 MTCO1P52-201ENST00000433928 531 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL645931.1-201ENST00000439737 410 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 RPL34P26-201ENST00000445636 354 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms