Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC100757.1-201ENST00000616872 1835 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 SNORA70.6-201ENST00000383934 134 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 OR6D1P-201ENST00000436165 939 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 SUMO2P3-201ENST00000438311 288 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AL450023.1-201ENST00000450868 751 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 LRRC37A14P-201ENST00000452297 462 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 NDUFA5P5-201ENST00000468361 342 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 RPSAP51-201ENST00000497462 645 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC093815.1-201ENST00000508637 280 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 ASNSP4-201ENST00000511103 447 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 SNORA43.3-201ENST00000517240 103 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 IGKV2-4-201ENST00000523070 340 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC005726.4-201ENST00000582858 458 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AL365181.4-201ENST00000609800 547 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 AC144833.1-201ENST00000567953 4089 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 LINC02019-201ENST00000608605 2060 ntBASIC5.54□□□□□ -1.52
TREX1Q9NSU2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AL162456.1-201ENST00000634535 2006 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 ADAM24P-201ENST00000398655 2101 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 YES1P1-201ENST00000418510 1628 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 RN7SKP292-201ENST00000365522 317 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 PPIAP9-201ENST00000403866 498 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 GAPDHP42-201ENST00000406848 981 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 MGAT2P2-201ENST00000427194 797 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 MIR7853-201ENST00000584820 132 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC100767.2-201ENST00000604840 693 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 PPATP2-201ENST00000605635 508 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC114786.1-201ENST00000512892 1415 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 AC015689.2-201ENST00000528172 1738 ntBASIC5.53□□□□□ -1.52
TREX1Q9NSU2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TREX1Q9NSU2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms