Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CISHQ9NSE2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CISHQ9NSE2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CISHQ9NSE2 RN7SKP124-201ENST00000364730 341 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AL391422.1-201ENST00000402155 436 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AL354868.1-201ENST00000417077 482 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC073465.2-201ENST00000440938 498 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 CYCSP51-201ENST00000443545 318 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 PSAT1P4-201ENST00000466500 526 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 RPSAP39-201ENST00000467439 883 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 IGLVIV-64-201ENST00000518581 301 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC004477.3-201ENST00000614061 590 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC079097.1-201ENST00000512187 1399 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CISHQ9NSE2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 AL359715.3-201ENST00000569267 2123 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AP002833.3-201ENST00000625075 2265 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC087516.1-201ENST00000561236 2428 ntBASIC5.87□□□□□ -1.47
CISHQ9NSE2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.87□□□□□ -1.47
CISHQ9NSE2 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AL137058.3-201ENST00000624531 3099 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC092681.1-201ENST00000297369 291 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 RNA5SP234-201ENST00000363916 119 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 SNORA16A-201ENST00000384342 137 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 Z93019.1-201ENST00000416450 973 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 NDUFB4P8-201ENST00000435351 367 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 RANP1-206ENST00000455094 651 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC091912.1-201ENST00000511351 248 ntBASIC5.86□□□□□ -1.47
CISHQ9NSE2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CISHQ9NSE2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CISHQ9NSE2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CISHQ9NSE2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 TTC41P-205ENST00000551270 3963 ntBASIC5.85□□□□□ -1.47
CISHQ9NSE2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CISHQ9NSE2 RNA5SP453-201ENST00000362503 119 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms