Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC005017.1-201ENST00000482002 490 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 NPM1P29-201ENST00000483112 803 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 RPS7P6-201ENST00000485777 579 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 RPS27P20-201ENST00000492051 246 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AP002453.1-201ENST00000492327 668 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 RN7SL591P-201ENST00000496150 292 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 GUSBP9-201ENST00000510138 584 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AC108103.1-201ENST00000511286 446 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 CR383658.1-201ENST00000514609 734 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 LDHBP3-201ENST00000514909 822 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AL135999.3-201ENST00000610501 812 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AC015819.1-201ENST00000613588 663 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AL139407.1-201ENST00000613826 1175 ntBASIC5.08□□□□□ -1.6
HMG20AQ9NP66 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMG20AQ9NP66 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AP004607.3-201ENST00000530354 3915 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 NEAT1-202ENST00000501122 22743 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 RN7SKP184-201ENST00000362348 333 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 RNU1-134P-201ENST00000362935 165 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AC092865.3-201ENST00000425390 1026 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 NANOGP4-201ENST00000427230 913 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 HSPD1P12-201ENST00000429127 1069 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 RPL7AP49-201ENST00000429522 581 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AL591438.1-201ENST00000433508 581 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 NPM1P33-201ENST00000438918 872 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 BMS1P10-201ENST00000443754 1120 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AL157385.1-201ENST00000446973 268 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 KF459542.1-201ENST00000450908 553 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AP000797.2-201ENST00000475768 606 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AP001000.1-201ENST00000526843 742 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 RN7SL230P-201ENST00000580835 303 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 MIR4701-201ENST00000583094 63 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 RN7SL435P-201ENST00000584418 282 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AC073488.3-201ENST00000631611 778 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AL138820.1-201ENST00000617901 5305 ntBASIC5.07□□□□□ -1.6
HMG20AQ9NP66 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HMG20AQ9NP66 AC100778.3-201ENST00000580060 1750 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 STX3-208ENST00000641815 3236 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 RNA5SP110-201ENST00000362638 115 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 UBBP2-201ENST00000376781 231 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 AL078599.1-201ENST00000402075 293 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 RPL10P10-201ENST00000403509 664 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 MIR1271-201ENST00000408537 86 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.06□□□□□ -1.6
HMG20AQ9NP66 TMEM183AP1-205ENST00000432739 290 ntBASIC5.06□□□□□ -1.6
HMG20AQ9NP66 FTLP8-201ENST00000446770 267 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms