Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC011742.2-201ENST00000443818 352 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 CT45A11P-201ENST00000448043 1134 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 RBMY2TP-201ENST00000451162 947 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC093765.1-201ENST00000603758 881 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 OR7E25P-202ENST00000641088 5937 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 THAP12P4-201ENST00000528321 2266 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 RPS23P2-201ENST00000463671 415 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC073365.1-203ENST00000641055 1992 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 ERG-206ENST00000398911 4914 ntTSL 5 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 Y_RNA.333-201ENST00000365274 102 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 MIR1182-201ENST00000408363 97 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 RPSAP35-201ENST00000413753 818 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 FAM32BP-201ENST00000344033 333 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 RNU1-85P-201ENST00000364127 164 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 RNU1-64P-201ENST00000365443 163 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 DDX39BP1-205ENST00000422507 192 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC007161.1-204ENST00000423039 460 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC093414.1-201ENST00000434712 514 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 SCARNA13-201ENST00000516672 275 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AC022916.3-201ENST00000592961 742 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AL139041.1-201ENST00000605480 610 ntBASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.52□□□□□ -1.69
CSMD1Q96PZ7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 BX284613.1-201ENST00000452221 1641 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 MYL6P5-201ENST00000412707 459 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AL158073.1-201ENST00000426848 1104 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AC024451.1-201ENST00000508013 779 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AC009643.1-201ENST00000532030 391 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AL513327.3-201ENST00000602618 469 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 NXF4-202ENST00000416098 1465 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 RNA5SP251-201ENST00000410614 137 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AL592293.2-201ENST00000422292 996 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 AC090607.5-201ENST00000615692 224 ntBASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CSMD1Q96PZ7 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms