Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC7Q96M83 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC7Q96M83 AC016745.2-201ENST00000608834 3443 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 RNA5SP234-201ENST00000363916 119 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC7Q96M83 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 AC006455.6-201ENST00000426192 893 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 LINC02210-201ENST00000444561 288 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 AZGP1P2-201ENST00000454506 345 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 RPL35AP19-201ENST00000469425 329 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 OR2AO1P-201ENST00000476497 403 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 AC087672.1-201ENST00000479876 766 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 AC084824.2-201ENST00000548906 345 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 DPPA3P2-201ENST00000553589 478 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 MIR8080-201ENST00000622224 89 ntBASIC7.78□□□□□ -1.16
CCDC7Q96M83 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC7Q96M83 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC7Q96M83 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CCDC7Q96M83 AL592429.1-201ENST00000403909 1473 ntBASIC7.77□□□□□ -1.16
CCDC7Q96M83 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
CCDC7Q96M83 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CCDC7Q96M83 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
CCDC7Q96M83 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CCDC7Q96M83 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC7Q96M83 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC7Q96M83 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC7Q96M83 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC7Q96M83 RNA5SP443-201ENST00000363083 132 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CCDC7Q96M83 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC7Q96M83 OR6D1P-201ENST00000436165 939 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 CNOT7P2-201ENST00000441051 832 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC7Q96M83 AL450023.1-201ENST00000450868 751 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC7Q96M83 AP000547.1-201ENST00000454360 617 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 RN7SL329P-201ENST00000467740 299 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 AC100832.1-201ENST00000471945 383 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 AC004815.1-201ENST00000484185 331 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 RN7SL30P-201ENST00000488416 306 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC7Q96M83 RNA5SP92-201ENST00000516437 110 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 SEPT10P1-201ENST00000517342 1162 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 PMS2P3-207ENST00000529061 717 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 OR5AM1P-201ENST00000532136 1032 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 PPATP2-201ENST00000605635 508 ntBASIC7.77□□□□□ -1.17
CCDC7Q96M83 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC7Q96M83 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC7Q96M83 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC7Q96M83 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CCDC7Q96M83 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC7Q96M83 AL022323.4-201ENST00000623980 13120 ntBASIC7.76□□□□□ -1.17
CCDC7Q96M83 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC7Q96M83 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AL158827.1-201ENST00000416300 391 ntBASIC7.76□□□□□ -1.17
CCDC7Q96M83 AL354868.1-201ENST00000417077 482 ntBASIC7.76□□□□□ -1.17
CCDC7Q96M83 LDHAP2-201ENST00000437325 985 ntBASIC7.76□□□□□ -1.17
CCDC7Q96M83 AC005532.2-201ENST00000467154 373 ntBASIC7.76□□□□□ -1.17
CCDC7Q96M83 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AL512329.2-201ENST00000607350 548 ntBASIC7.76□□□□□ -1.17
CCDC7Q96M83 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC7Q96M83 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 AL049634.1-201ENST00000453770 1720 ntBASIC7.76□□□□□ -1.17
CCDC7Q96M83 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC7Q96M83 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC7Q96M83 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC7Q96M83 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CCDC7Q96M83 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
CCDC7Q96M83 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC7Q96M83 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC7Q96M83 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC7Q96M83 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CCDC7Q96M83 RNA5SP183-201ENST00000362452 119 ntBASIC7.75□□□□□ -1.17
CCDC7Q96M83 RN7SKP145-201ENST00000363291 303 ntBASIC7.75□□□□□ -1.17
CCDC7Q96M83 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms