Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 Vault.2-201ENST00000516519 98 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC067904.2-201ENST00000517322 1283 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC103833.1-201ENST00000517442 172 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 IGHV4-55-201ENST00000520889 368 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 IGKV2-4-201ENST00000523070 340 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AP001372.4-201ENST00000524889 472 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC008147.3-201ENST00000548666 354 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AL121594.4-201ENST00000556211 1196 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC005632.2-201ENST00000564271 828 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 NDUFA5P11-201ENST00000567995 343 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 MIR4502-201ENST00000580432 81 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC025857.2-201ENST00000602711 238 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC004775.1-201ENST00000607389 753 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC112503.2-201ENST00000609005 552 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC111152.1-202ENST00000635848 339 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 MTCO1P7-201ENST00000419523 1542 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC004158.1-201ENST00000564508 4319 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS50Q96JG6 RNA5SP478-201ENST00000364657 115 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 RN7SKP81-201ENST00000365603 331 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 ST13P16-201ENST00000401760 781 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS50Q96JG6 RN7SKP144-201ENST00000411108 279 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 CYP4F30P-202ENST00000420048 405 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 MTCO2P17-201ENST00000424336 677 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 AL157884.1-201ENST00000424561 454 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC092865.3-201ENST00000425390 1026 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 AL512637.2-201ENST00000431287 1256 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC091544.1-201ENST00000484702 348 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 SNX18P25-201ENST00000510539 758 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 OSBPL9P3-201ENST00000534523 595 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 CD24P2-201ENST00000565486 219 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC245389.2-201ENST00000616023 576 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC242843.1-201ENST00000618702 573 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC099654.8-201ENST00000637757 681 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC006927.4-201ENST00000639187 543 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AOX3P-204ENST00000491025 2107 ntBASIC6.02□□□□□ -1.45
VPS50Q96JG6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS50Q96JG6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS50Q96JG6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS50Q96JG6 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS50Q96JG6 AC109446.4-201ENST00000623235 2755 ntBASIC6.01□□□□□ -1.45
VPS50Q96JG6 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.01□□□□□ -1.45
VPS50Q96JG6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 CDC27P2-201ENST00000425026 1922 ntBASIC6.01□□□□□ -1.45
VPS50Q96JG6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
VPS50Q96JG6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS50Q96JG6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 CASC19-261ENST00000641853 1638 ntBASIC6.01□□□□□ -1.45
VPS50Q96JG6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS50Q96JG6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS50Q96JG6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms